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04302015_24_scaffold_87

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Displaying items 1-30 of 79 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_24_scaffold_87_1
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(441..1724)
DNA (1284bp) protein (428aa)
Cardiolipin synthetase {ECO:0000313|EMBL:CDS54800.1}; EC=2.7.8.- {ECO:0000313|EMBL:CDS54800.1};; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
cardiolipin synthetase n=1 Tax=Acidovorax radicis RepID=UPI0002375F29
phospholipase D/transphosphatidylase
04302015_24_scaffold_87_2
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1898..2626
DNA (729bp) protein (243aa)
ribosomal small subunit pseudouridine synthase A (EC:5.4.99.-); K06183 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] rbh
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
Pseudouridine synthase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12CK7_POLSJ rbh
04302015_24_scaffold_87_3
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2709..3491)
DNA (783bp) protein (261aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Polaromonas sp. CF318 RepID=J3D2I6_9BURK rbh
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:EJL83216.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein
04302015_24_scaffold_87_4
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3586..4569
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12CK5_POLSJ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE43737.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_24_scaffold_87_5
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4826..5536
DNA (711bp) protein (237aa)
Polysaccharide deacetylase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12CK4_POLSJ rbh
polysaccharide deacetylase rbh
Polysaccharide deacetylase {ECO:0000313|EMBL:ABE43738.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_24_scaffold_87_6
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5541..6509
DNA (969bp) protein (323aa)
Putative membrane protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12CK3_POLSJ rbh
hypothetical protein rbh
Putative membrane protein {ECO:0000313|EMBL:ABE43739.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_24_scaffold_87_7
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6545..7471
DNA (927bp) protein (309aa)
Putative transmembrane protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12CK2_POLSJ rbh
hypothetical protein rbh
Putative transmembrane protein {ECO:0000313|EMBL:ABE43740.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_24_scaffold_87_8
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7488..8312
DNA (825bp) protein (275aa)
Molybdopterin binding domain n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12CK1_POLSJ
molybdopterin-binding domain-containing protein
Molybdopterin binding domain {ECO:0000313|EMBL:ABE43741.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_24_scaffold_87_9
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8548..9963
DNA (1416bp) protein (472aa)
L-glutamine synthetase (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2]
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Glutamine synthetase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12CK0_POLSJ
04302015_24_scaffold_87_10
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10112..10630
DNA (519bp) protein (173aa)
Conserved hypothetical signal peptide protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12CJ9_POLSJ
putative signal peptide protein
Conserved hypothetical signal peptide protein {ECO:0000313|EMBL:ABE43743.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_24_scaffold_87_11
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10656..11747
DNA (1092bp) protein (364aa)
signal transduction histidine kinase NtrB (EC:2.7.3.-); K07708 two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12CJ8_POLSJ rbh
04302015_24_scaffold_87_12
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11796..13340
DNA (1545bp) protein (515aa)
Nitrogen regulation protein NR(I) n=1 Tax=Polaromonas sp. CF318 RepID=J2TWN1_9BURK rbh
Nitrogen regulation protein NR(I) {ECO:0000313|EMBL:EJL83207.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
nitrogen metabolism transcriptional regulator NtrC; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG rbh
04302015_24_scaffold_87_13
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13442..13702
DNA (261bp) protein (87aa)
Restriction endonuclease n=1 Tax=Polaromonas sp. CF318 RepID=J2U4F0_9BURK
HNH nuclease
Restriction endonuclease {ECO:0000313|EMBL:EJL86007.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
04302015_24_scaffold_87_14
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13756..14538)
DNA (783bp) protein (261aa)
exodeoxyribonuclease III (EC:3.1.11.2); K01142 exodeoxyribonuclease III [EC:3.1.11.2] rbh
Exodeoxyribonuclease III {ECO:0000313|EMBL:ABE43753.1}; EC=3.1.11.2 {ECO:0000313|EMBL:ABE43753.1};; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Exodeoxyribonuclease III n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12CI9_POLSJ rbh
04302015_24_scaffold_87_15
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14535..15029)
DNA (495bp) protein (165aa)
dihydrofolate reductase (EC:1.5.1.3); K00287 dihydrofolate reductase [EC:1.5.1.3]
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Dihydrofolate reductase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W5A2_ACISJ
04302015_24_scaffold_87_16
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15438..16271)
DNA (834bp) protein (278aa)
thyA; thymidylate synthase (EC:2.1.1.45); K00560 thymidylate synthase [EC:2.1.1.45]
Thymidylate synthase {ECO:0000255|HAMAP-Rule:MF_00008}; Short=TS {ECO:0000255|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000255|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000255|HAMAP-Rule:MF_00008};; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Thymidylate synthase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=TYSY_POLSJ
04302015_24_scaffold_87_17
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16273..16587)
DNA (315bp) protein (105aa)
CcdB protein n=1 Tax=Polaromonas sp. CF318 RepID=J2U6X5_9BURK
CcdB protein {ECO:0000313|EMBL:EJL86932.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
CcdB-like protein toxin protein
04302015_24_scaffold_87_18
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16590..16829)
DNA (240bp) protein (80aa)
Post-segregation antitoxin (Ccd killing mechanism protein) encoded by the F plasmid n=1 Tax=Polaromonas sp. CF318 RepID=J3D8S1_9BURK
Post-segregation antitoxin (Ccd killing mechanism protein) encoded by the F plasmid {ECO:0000313|EMBL:EJL86931.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
post-segregation antitoxin
04302015_24_scaffold_87_19
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16857..18269)
DNA (1413bp) protein (471aa)
FAD linked oxidase-like protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12CI1_POLSJ
FAD linked oxidase-like protein
FAD linked oxidase-like protein {ECO:0000313|EMBL:ABE43761.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_24_scaffold_87_20
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18277..18663)
DNA (387bp) protein (129aa)
Membrane protein-like protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12CI0_POLSJ
hypothetical protein
Membrane protein-like protein {ECO:0000313|EMBL:ABE43762.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_24_scaffold_87_21
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18685..19911
DNA (1227bp) protein (409aa)
UPF0761 membrane protein PMI15_01267 n=1 Tax=Polaromonas sp. CF318 RepID=J2LNQ8_9BURK
UPF0761 membrane protein PMI15_01267 {ECO:0000256|HAMAP-Rule:MF_00672}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
ribonuclease BN; K07058 membrane protein
04302015_24_scaffold_87_22
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19966..20310)
DNA (345bp) protein (115aa)
Membrane protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C310_9BURK
membrane protein
Membrane protein {ECO:0000313|EMBL:EHL20883.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
04302015_24_scaffold_87_23
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20460..20741
DNA (282bp) protein (94aa)
Thioredoxin domain protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T3N1_ACIDE
hypothetical protein
Thioredoxin domain protein {ECO:0000313|EMBL:EER60894.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
04302015_24_scaffold_87_24
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20733..22034)
DNA (1302bp) protein (434aa)
cytochromes P450; K00517 [EC:1.14.-.-] rbh
Cytochromes P450-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y480_RAMTT rbh
Cytochromes P450-like protein {ECO:0000313|EMBL:AEG92545.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
04302015_24_scaffold_87_25
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22179..22505)
DNA (327bp) protein (109aa)
High-potential iron-sulfur protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VIW1_POLNA
High-potential iron-sulfur protein {ECO:0000256|RuleBase:RU000620}; Short=HiPIP {ECO:0000256|RuleBase:RU000620};; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
high potential iron-sulfur protein
04302015_24_scaffold_87_26
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22936..23757)
DNA (822bp) protein (274aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Polaromonas sp. CF318 RepID=J2L3Q0_9BURK rbh
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:EJL86920.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
alpha/beta hydrolase fold protein rbh
04302015_24_scaffold_87_27
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23754..25052)
DNA (1299bp) protein (433aa)
O-acetylhomoserine aminocarboxypropyltransferase (EC:2.5.1.49); K01740 O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] rbh
OAH/OAS sulfhydrylase n=1 Tax=Polaromonas sp. CF318 RepID=J3D8L3_9BURK rbh
OAH/OAS sulfhydrylase {ECO:0000313|EMBL:EJL86919.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
04302015_24_scaffold_87_28
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25222..25686
DNA (465bp) protein (155aa)
CBS domain n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12CH2_POLSJ
CBS domain-containing protein
CBS domain {ECO:0000313|EMBL:ABE43770.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_24_scaffold_87_29
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25936..27156)
DNA (1221bp) protein (407aa)
polyhydroxyalkanoate depolymerase; K05973 poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75] rbh
Polyhydroxyalkanoate depolymerase, intracellular n=1 Tax=Polaromonas sp. CF318 RepID=J3D8K8_9BURK rbh
Polyhydroxyalkanoate depolymerase, intracellular {ECO:0000313|EMBL:EJL86914.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
04302015_24_scaffold_87_30
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27309..27965
DNA (657bp) protein (219aa)
glutathione S-transferase-like protein; K04097 glutathione S-transferase [EC:2.5.1.18] rbh
Glutathione S-transferase n=1 Tax=Polaromonas sp. CF318 RepID=J2LNP4_9BURK rbh
Glutathione S-transferase {ECO:0000313|EMBL:EJL86913.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
Displaying items 1-30 of 79 in total

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