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04302015_24_scaffold_529

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_24_scaffold_529_1
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(564..1592)
DNA (1029bp) protein (343aa)
Sel1 domain protein repeat-containing protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TW19_9PROT
Sel1 domain protein repeat-containing protein {ECO:0000313|EMBL:EDP63488.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
sel-1-like repeats-containing protein
04302015_24_scaffold_529_2
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1781..2197)
DNA (417bp) protein (139aa)
Putative secreted hydrolase n=1 Tax=Polaromonas sp. CF318 RepID=J3D9S4_9BURK
Putative secreted hydrolase {ECO:0000313|EMBL:EJL87579.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
secreted hydrolase-like protein
04302015_24_scaffold_529_3
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2327..3148)
DNA (822bp) protein (274aa)
glutamate racemase (EC:5.1.1.3); K01776 glutamate racemase [EC:5.1.1.3] rbh
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
Glutamate racemase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VRA5_POLNA rbh
04302015_24_scaffold_529_4
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3145..4191)
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A5A005
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
04302015_24_scaffold_529_5
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4287..5855)
DNA (1569bp) protein (523aa)
fumarase (EC:4.2.1.2); K01676 fumarate hydratase, class I [EC:4.2.1.2]
Fumarase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12BW6_POLSJ
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
04302015_24_scaffold_529_6
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6097..7074
DNA (978bp) protein (326aa)
MpdB n=1 Tax=Burkholderia cepacia RepID=Q52I83_BURCE rbh
methyl parathion-degrading protein rbh
MpdB {ECO:0000313|EMBL:AAY18224.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
04302015_24_scaffold_529_7
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7252..8661
DNA (1410bp) protein (470aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
fumC; fumarate hydratase (EC:4.2.1.2); K01679 fumarate hydratase, class II [EC:4.2.1.2]
Fumarate hydratase class II n=1 Tax=Polaromonas sp. CF318 RepID=J3D0Z1_9BURK rbh
04302015_24_scaffold_529_8
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8816..10006
DNA (1191bp) protein (397aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Polaromonas sp. CF318 RepID=J2KQU7_9BURK rbh
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
Na+/H+ antiporter NhaA; K03313 Na+:H+ antiporter, NhaA family rbh
04302015_24_scaffold_529_9
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10103..10705)
DNA (603bp) protein (201aa)
UPF0114 protein Bpro_2048 n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12BW4_POLSJ
hypothetical protein
UPF0114 protein Bpro_2048 {ECO:0000256|HAMAP-Rule:MF_00143}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_24_scaffold_529_10
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10856..12853
DNA (1998bp) protein (666aa)
acetyl-coenzyme A synthetase (EC:6.2.1.1); K01895 acetyl-CoA synthetase [EC:6.2.1.1] rbh
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Acetyl-coenzyme A synthetase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12BW3_POLSJ rbh
04302015_24_scaffold_529_11
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12966..13292)
DNA (327bp) protein (109aa)
Cytochrome c, class I n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12BW2_POLSJ
class I cytochrome c
Cytochrome c, class I {ECO:0000313|EMBL:ABE43980.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_24_scaffold_529_12
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13441..13683
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12BW1_POLSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE43981.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_24_scaffold_529_13
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13955..15658)
DNA (1704bp) protein (568aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] rbh
Dihydroxy-acid dehydratase n=1 Tax=Polaromonas sp. CF318 RepID=J2KQV4_9BURK rbh
04302015_24_scaffold_529_14
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15757..16779
DNA (1023bp) protein (341aa)
Transcriptional regulator n=1 Tax=Polaromonas sp. CF318 RepID=J3D1B8_9BURK rbh
Transcriptional regulator {ECO:0000313|EMBL:EJL82501.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
LysR family transcriptional regulator
04302015_24_scaffold_529_15
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16843..17658
DNA (816bp) protein (272aa)
prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] rbh
Prolipoprotein diacylglyceryl transferase {ECO:0000255|HAMAP-Rule:MF_01147}; EC=2.4.99.- {ECO:0000255|HAMAP-Rule:MF_01147};; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=LGT_POLNA rbh
04302015_24_scaffold_529_16
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18116..18784
DNA (669bp) protein (223aa)
Transcriptional regulator n=1 Tax=Polaromonas sp. CF318 RepID=J3D0Z8_9BURK rbh
Transcriptional regulator {ECO:0000313|EMBL:EJL82504.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
GntR family transcriptional regulator rbh
04302015_24_scaffold_529_17
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18781..19302
DNA (522bp) protein (174aa)
malonyl-CoA decarboxylase (EC:4.1.1.9); K01578 malonyl-CoA decarboxylase [EC:4.1.1.9]
Malonyl-CoA decarboxylase {ECO:0000313|EMBL:ABE44018.1}; EC=4.1.1.9 {ECO:0000313|EMBL:ABE44018.1};; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Malonyl-CoA decarboxylase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12BS4_POLSJ
Displaying 17 items

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