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04302015_24_scaffold_950

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_24_scaffold_950_1
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2..532
DNA (531bp) protein (177aa)
myosin-crossreactive antigen rbh
Blr1289 protein id=4635641 bin=GWC2_Geobacteraceae_55_20 species=Synechocystis sp. PCC 7509 genus=Synechocystis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria rbh
Tax=GWC2_Geobacteraceae_55_20_curated
04302015_24_scaffold_950_2
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(565..1131)
DNA (567bp) protein (189aa)
DedA family protein n=1 Tax=Vibrio fluvialis PG41 RepID=S7JFT1_VIBFL
hypothetical protein
Tax=BJP_IG2103_Rhodocyclales_63_50
04302015_24_scaffold_950_trna_3
unknown

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comp(1343..1416)
DNA (74bp)
transferRNA
04302015_24_scaffold_950_trna_2
unknown

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comp(1533..1605)
DNA (73bp)
transferRNA
04302015_24_scaffold_950_trna_1
unknown

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comp(1708..1780)
DNA (73bp)
transferRNA
04302015_24_scaffold_950_3
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1860..3254)
DNA (1395bp) protein (465aa)
gltX; glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] rbh
Glutamate--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000255|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00022}; Short=GluRS {ECO:0000255|HAMAP-Rule:MF_00022};; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
Glutamate--tRNA ligase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=SYE_POLNA rbh
04302015_24_scaffold_950_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3251..4465)
DNA (1215bp) protein (405aa)
O-succinylhomoserine sulfhydrylase (EC:2.5.1.-)
O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:AGU50967.1}; EC=2.5.1.- {ECO:0000313|EMBL:AGU50967.1};; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
O-succinylhomoserine sulfhydrylase n=1 Tax=Variovorax paradoxus B4 RepID=T1XDE0_VARPD
04302015_24_scaffold_950_5
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4468..5985)
DNA (1518bp) protein (506aa)
amidophosphoribosyltransferase (EC:2.4.2.14); K00764 amidophosphoribosyltransferase [EC:2.4.2.14] rbh
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas
Amidophosphoribosyltransferase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12D47_POLSJ rbh
04302015_24_scaffold_950_6
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6107..6592)
DNA (486bp) protein (162aa)
Colicin V production protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12D48_POLSJ
colicin V production protein; K03558 membrane protein required for colicin V production
Colicin V production protein {ECO:0000313|EMBL:ABE43544.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_24_scaffold_950_7
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6610..7446)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J2L1Z2_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL86320.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein; K03749 DedD protein rbh
04302015_24_scaffold_950_8
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7600..9042)
DNA (1443bp) protein (481aa)
bifunctional folylpolyglutamate synthase/dihydrofolate synthase; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] rbh
FolC bifunctional protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VL78_POLNA rbh
FolC bifunctional protein {ECO:0000313|EMBL:ABM36406.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
04302015_24_scaffold_950_9
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9708..10631
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034CCA28
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
04302015_24_scaffold_950_10
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10851..11768
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI0003667E88
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
04302015_24_scaffold_950_11
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11765..12997
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIE0_ACIET
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
04302015_24_scaffold_950_12
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13123..13839)
DNA (717bp) protein (239aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q125V1_POLSJ rbh
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein rbh
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family {ECO:0000313|EMBL:ABE45691.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_24_scaffold_950_13
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13854..14621)
DNA (768bp) protein (256aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q125V0_POLSJ rbh
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein rbh
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family {ECO:0000313|EMBL:ABE45692.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_24_scaffold_950_14
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14633..15367)
DNA (735bp) protein (245aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=Polaromonas sp. CF318 RepID=J2LCG9_9BURK
Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) {ECO:0000313|EMBL:CDS50571.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
Displaying 17 items

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