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04302015_24_scaffold_456_12

Organism: 04302015_24_Polaromonas_62_144

near complete RP 48 / 55 BSCG 45 / 51 ASCG 11 / 38
Location: comp(9056..9307)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Polaromonas sp. CF318 RepID=J2TT91_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 83.0
  • Bit_score: 158
  • Evalue 4.00e-36
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 83.0
  • Bit_score: 158
  • Evalue 5.60e-36
hfq; RNA-binding protein Hfq; K03666 host factor-I protein similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 83.0
  • Bit_score: 156
  • Evalue 3.70e-36

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Taxonomy

Polaromonas sp. CF318 → Polaromonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 252
GTGAGCAATAACAAAGGTCAGCTCTTGCAGGACCCTTTTCTCAACACCCTGCGCCGCGAGCATGTGCCCGTTTCGATTTATCTGGTGAACGGCATCAAGCTGCAGGGCCAGATCGAATCGTTCGACCAGTACGTCGTGTTGCTTCGCAACACCGTAACCCAGATGGTTTACAAGCACGCCATTTCCACCATCGTGCCAGGCCGAGCCGTTAATTTTTCCGCCAGCGACCCCGAAGAAAGCCCCTCCAGCTGA
PROTEIN sequence
Length: 84
VSNNKGQLLQDPFLNTLRREHVPVSIYLVNGIKLQGQIESFDQYVVLLRNTVTQMVYKHAISTIVPGRAVNFSASDPEESPSS*