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04302015_24_scaffold_284

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Displaying items 1-30 of 37 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_24_scaffold_284_trna_1
unknown

Not on your lists

12..85
DNA (74bp)
transferRNA
04302015_24_scaffold_284_1
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45..1748)
DNA (1704bp) protein (568aa)
Putative recombinase (Fragment) n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A090_9SPHN rbh
Resolvase {ECO:0000313|EMBL:KGJ03454.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
recombinase rbh
04302015_24_scaffold_284_2
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1768..2004)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NWT8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGJ03455.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
hypothetical protein
04302015_24_scaffold_284_3
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2261..2560
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YQS6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD51062.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
04302015_24_scaffold_284_4
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2564..3067
DNA (504bp) protein (168aa)
GCN5 family acetyltransferase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00037442D3 rbh
GCN5 family acetyltransferase {ECO:0000313|EMBL:KDP73354.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
N-acetyltransferase GCN5
04302015_24_scaffold_284_5
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3313..4071
DNA (759bp) protein (253aa)
Extracellular solute-binding protein family 1 n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYI5_THIK1
extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADG32162.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_24_scaffold_284_6
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4399..5358
DNA (960bp) protein (320aa)
Antirestriction protein ArdC n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J1A7_POLGS rbh
Antirestriction protein {ECO:0000313|EMBL:CDN94499.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
antirestriction protein ArdC rbh
04302015_24_scaffold_284_7
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5355..5726
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BP3_MESSB
Single-stranded DNA endonuclease {ECO:0000313|EMBL:KGE80068.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
hypothetical protein
04302015_24_scaffold_284_8
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5726..6502
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BP2_MESSB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABG65183.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
04302015_24_scaffold_284_9
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6706..7104
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BP1_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG65184.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
04302015_24_scaffold_284_10
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7097..7486
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BP0_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG65185.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
04302015_24_scaffold_284_11
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7635..8039
DNA (405bp) protein (135aa)
CheY-like receiver domain-containing protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YSA5_9RHIZ
CheY-like receiver domain-containing protein {ECO:0000313|EMBL:EIM26847.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
response regulator
04302015_24_scaffold_284_12
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8157..10304
DNA (2148bp) protein (716aa)
ParB-like protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J1A4_POLGS rbh
ParB-like protein {ECO:0000313|EMBL:ADZ68749.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
ParB-like protein; K03497 chromosome partitioning protein, ParB family rbh
04302015_24_scaffold_284_13
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10404..10877
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4E3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52823.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
04302015_24_scaffold_284_14
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10949..11215
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UC83_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EGP55061.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
hypothetical protein
04302015_24_scaffold_284_15
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11212..11508
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2N0Y1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF41138.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
04302015_24_scaffold_284_16
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11886..12050
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2PJ28_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF41137.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
04302015_24_scaffold_284_17
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12237..12794
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P1C0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF41136.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
04302015_24_scaffold_284_18
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12861..13262
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BN5_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG65190.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
04302015_24_scaffold_284_19
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13272..13466
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QHM2_BREDI
Uncharacterized protein {ECO:0000313|EMBL:KGE80061.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
hypothetical protein
04302015_24_scaffold_284_20
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13535..13957
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRV8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR77563.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
04302015_24_scaffold_284_21
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13954..14226
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Ochrobactrum intermedium M86 RepID=M5JLA0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ELT47475.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
hypothetical protein
04302015_24_scaffold_284_22
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14294..14710
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JAA0_OLICO
Uncharacterized protein {ECO:0000313|EMBL:KIC55707.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
hypothetical protein
04302015_24_scaffold_284_23
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15232..15630)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UC50_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:CDN94513.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
04302015_24_scaffold_284_24
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15890..20239
DNA (4350bp) protein (1450aa)
Methylase/helicase n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UC49_RHIRD rbh
Methylase/helicase {ECO:0000313|EMBL:CDN94514.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
methylase/helicase rbh
04302015_24_scaffold_284_25
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20239..21282
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UC48_RHIRD rbh
Uncharacterized protein {ECO:0000313|EMBL:CDN94515.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
DNA primase rbh
04302015_24_scaffold_284_26
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21614..22552
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UC47_RHIRD rbh
Uncharacterized protein {ECO:0000313|EMBL:EGP55055.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
hypothetical protein rbh
04302015_24_scaffold_284_27
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22716..23132
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UC46_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:KGJ02962.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
hypothetical protein
04302015_24_scaffold_284_28
unknown

Not on your lists

comp(23368..23553)
DNA (186bp) protein (62aa)

This feature has no annotations

04302015_24_scaffold_284_29
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23847..24251
DNA (405bp) protein (135aa)
Single-stranded DNA-binding protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UC45_RHIRD
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
ssDNA-binding protein; K03111 single-strand DNA-binding protein
Displaying items 1-30 of 37 in total

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