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04302015_24_scaffold_20

Search features with annotation key words

Displaying items 1-30 of 233 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_24_scaffold_20_1
unknown

Not on your lists

2..145
DNA (144bp) protein (48aa)

This feature has no annotations

04302015_24_scaffold_20_2
Bartonella rattimassiliensis, Bartonella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

189..449
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Bartonella rattimassiliensis 15908 RepID=J1JLI6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJF85547.1}; TaxID=1094556 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bartonellaceae; Bartonella.;" source="Bartonella rattimassiliensis 15908.;"
putative transmembrane protein
04302015_24_scaffold_20_3
Agarivorans albus, Agarivorans, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

457..1020
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Agarivorans albus MKT 106 RepID=R9PFN0_AGAAL
Uncharacterized protein {ECO:0000313|EMBL:GAD00157.1}; TaxID=1331007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Agarivorans.;" source="Agarivorans albus MKT 106.;"
bacteriophage-acquired protein
04302015_24_scaffold_20_4
unknown

Not on your lists

1017..1310
DNA (294bp) protein (98aa)

This feature has no annotations

04302015_24_scaffold_20_5
unknown

Not on your lists

1346..1765
DNA (420bp) protein (140aa)

This feature has no annotations

04302015_24_scaffold_20_6
unknown

Not on your lists

1765..1995
DNA (231bp) protein (77aa)

This feature has no annotations

04302015_24_scaffold_20_7
unknown

Not on your lists

1964..2212
DNA (249bp) protein (83aa)

This feature has no annotations

04302015_24_scaffold_20_8
unknown

Not on your lists

2244..2678
DNA (435bp) protein (145aa)

This feature has no annotations

04302015_24_scaffold_20_9
RBG_13_Chloroflexi_46_14_curated, Chloroflexi, Bacteria

Not on your lists

2681..3667
DNA (987bp) protein (329aa)
DNA methylase N-4/N-6 domain-containing protein; K07319 putative adenine-specific DNA-methyltransferase [EC:2.1.1.72]
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037F6E26
Tax=RBG_13_Chloroflexi_46_14_curated
04302015_24_scaffold_20_10
unknown

Not on your lists

3672..4322
DNA (651bp) protein (217aa)

This feature has no annotations

04302015_24_scaffold_20_11
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4590..4865
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13W73_BURXL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE31666.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
04302015_24_scaffold_20_12
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4858..5235
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13W72_BURXL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE31667.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
04302015_24_scaffold_20_13
unknown

Not on your lists

5360..5575
DNA (216bp) protein (72aa)

This feature has no annotations

04302015_24_scaffold_20_14
Coraliomargarita akajimensis, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(6008..6727)
DNA (720bp) protein (240aa)
alpha/beta hydrolase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034688BF
alpha/beta hydrolase; K07020
Hydrolase-like protein protein of the alpha/beta-hydrolase fold family {ECO:0000313|EMBL:ADE53145.1}; TaxID=583355 species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita.;" source="Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193; / KCTC 12865).;"
04302015_24_scaffold_20_15
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6996..8018
DNA (1023bp) protein (341aa)
Ferredoxin--NADP reductase {ECO:0000256|HAMAP-Rule:MF_01685}; Short=FNR {ECO:0000256|HAMAP-Rule:MF_01685};; Short=Fd-NADP(+) reductase {ECO:0000256|HAMAP-Rule:MF_01685};; EC=1.18.1.2 {ECO:0000256|HAMAP-Rule:MF_01685};; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
trxB; thioredoxin reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] rbh
Ferredoxin--NADP reductase n=1 Tax=Oceanibaculum indicum P24 RepID=K2IE19_9PROT rbh
04302015_24_scaffold_20_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8029..8772
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003618816
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
04302015_24_scaffold_20_17
Pseudomonas resinovorans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8893..10146)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AEG3_PSERE rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAN48017.1}; TaxID=1245471 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas resinovorans NBRC 106553.;"
04302015_24_scaffold_20_18
Acetobacter pasteurianus, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10155..12596)
DNA (2442bp) protein (814aa)
TonB-dependent siderophore receptor n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QU64_METTR
Ferrichrome siderophore receptor FcuA {ECO:0000313|EMBL:GAB28827.1}; TaxID=1006554 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter pasteurianus NBRC 101655.;"
ufrA; TonB-dependent siderophore receptor
04302015_24_scaffold_20_19
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12711..13694)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H2N9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKV31852.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
fecR; two component sensor histidine kinase FecR/PupR
04302015_24_scaffold_20_20
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13785..14201)
DNA (417bp) protein (139aa)
Sigma-24 (FecI) n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TNT6_TISMK
fecI; sigma-24 (FecI)
Sigma-24 (FecI) {ECO:0000313|EMBL:AFK54424.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
04302015_24_scaffold_20_21
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14358..15434)
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035FB4BE
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETR74734.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
oligopeptide/dipeptide ABC transporter ATPase subunit; K02032 peptide/nickel transport system ATP-binding protein rbh
04302015_24_scaffold_20_22
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15431..16474)
DNA (1044bp) protein (348aa)
Oligopeptide/dipeptide ABC transporter ATPase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JMD3_9PROT rbh
Oligopeptide/dipeptide ABC transporter ATPase {ECO:0000313|EMBL:EKE76498.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
oligopeptide ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein rbh
04302015_24_scaffold_20_23
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16515..17978)
DNA (1464bp) protein (488aa)
Amidohydrolase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JPM1_9PROT rbh
Amidohydrolase {ECO:0000313|EMBL:EKE76497.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
amidohydrolase rbh
04302015_24_scaffold_20_24
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18013..19587)
DNA (1575bp) protein (525aa)
Family 5 extracellular solute-binding protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2J0P8_9PROT rbh
Family 5 extracellular solute-binding protein {ECO:0000313|EMBL:EKE76496.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
family 5 extracellular solute-binding protein
04302015_24_scaffold_20_25
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19612..20517)
DNA (906bp) protein (302aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Oceanibaculum indicum P24 RepID=K2KGN9_9PROT rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EKE76495.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein
04302015_24_scaffold_20_26
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20514..21425)
DNA (912bp) protein (304aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Oceanibaculum indicum P24 RepID=K2K105_9PROT rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EKE76494.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein
04302015_24_scaffold_20_27
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21589..22545
DNA (957bp) protein (319aa)
dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52] rbh
dihydrodipicolinate synthetase n=1 Tax=Erwinia toletana RepID=UPI00035D6BDC rbh
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:KGE00414.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
04302015_24_scaffold_20_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22550..24019
DNA (1470bp) protein (490aa)
dihydropyrimidinase (EC:3.5.2.2); K01464 dihydropyrimidinase [EC:3.5.2.2] rbh
dihydropyrimidinase n=1 Tax=Herbaspirillum seropedicae RepID=UPI000306C0ED rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
04302015_24_scaffold_20_29
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

24127..25077
DNA (951bp) protein (317aa)
N-carbamoyl-D-amino-acid hydrolase (EC:3.5.1.77) rbh
Nitrilase n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0GAA2_9BURK rbh
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
04302015_24_scaffold_20_30
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25088..25711
DNA (624bp) protein (208aa)
Conserved protein of DIM6/NTAB family n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2VZ69_9BRAD rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 1-30 of 233 in total

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