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04302015_24_scaffold_24

Search features with annotation key words

Displaying items 1-30 of 169 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_24_scaffold_24_1
unknown

Not on your lists

comp(3..380)
DNA (378bp) protein (126aa)

This feature has no annotations

04302015_24_scaffold_24_2
unknown

Not on your lists

comp(656..832)
DNA (177bp) protein (59aa)

This feature has no annotations

04302015_24_scaffold_24_3
Synechococcus sp. PCC 7002, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1070..2797
DNA (1728bp) protein (576aa)
TPR repeat-containing protein SYNPCC7002_A0425 n=1 Tax=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) RepID=Y425_SYNP2
hypothetical protein
TPR repeat-containing protein SYNPCC7002_A0425; TaxID=32049 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum; quadruplicatum).;"
04302015_24_scaffold_24_4
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(2748..4202)
DNA (1455bp) protein (485aa)
Inositol 2-dehydrogenase id=4421154 bin=GWF2_Lentisphaerae_50_93 species=Paenibacillus alvei genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
inositol 2-dehydrogenase
Tax=GWF2_Lentisphaerae_50_93_curated
04302015_24_scaffold_24_5
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4505..7327
DNA (2823bp) protein (941aa)
Glycosyltransferase n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z1R5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJE35856.1}; TaxID=1616823 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira sp. HJ.;"
wbpT; capsular polysaccharide biosynthesis protein
04302015_24_scaffold_24_6
unknown

Not on your lists

7317..10130
DNA (2814bp) protein (938aa)

This feature has no annotations

04302015_24_scaffold_24_7
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

10134..12101
DNA (1968bp) protein (656aa)
asparagine synthase (EC:6.3.5.4); K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034C8062
Tax=RBG_16_Planctomycetes_64_10_curated
04302015_24_scaffold_24_8
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12120..12518)
DNA (399bp) protein (133aa)
UPI0003CF33A3 related cluster n=1 Tax=unknown RepID=UPI0003CF33A3
Transposase {ECO:0000313|EMBL:CDX11404.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ISRm2011-2 transposase; K07494 putative transposase
04302015_24_scaffold_24_9
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12683..13066)
DNA (384bp) protein (128aa)
Probabable ISRm2011-2 transposase protein, N-terminal portion n=7 Tax=Rhizobium meliloti RepID=F7X9X6_SINMM
TRm2011-3a transposase
Probable ISRm2011-2 transposase protein,N-terminal portion {ECO:0000313|EMBL:CAC48696.1}; Putative transposase for insertion sequence element ISRm11/ISRm2011-2 {ECO:0000313|EMBL:CAC45904.1}; Putative transposase of insertion sequence ISRm2011-2, orfA protein {ECO:0000313|EMBL:CAC49875.1}; TRm2011-2a transposase {ECO:0000313|EMBL:AAK64667.1}; Transposase for insertion sequence element ISRm11/ISRm2011-2 {ECO:0000313|EMBL:CAC45168.1}; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobi
04302015_24_scaffold_24_10
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13139..13405
DNA (267bp) protein (89aa)
Transposase n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z0X9_9RHIZ
Transposase {ECO:0000313|EMBL:EIM29871.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
IS3 family transposase; K07497 putative transposase
04302015_24_scaffold_24_11
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13630..14331
DNA (702bp) protein (234aa)
Integrase, catalytic domain protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ETP0_BRASB
integrase catalytic subunit
Integrase, catalytic domain protein {ECO:0000313|EMBL:ABQ39534.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
04302015_24_scaffold_24_12
unknown

Not on your lists

comp(14469..16442)
DNA (1974bp) protein (658aa)

This feature has no annotations

04302015_24_scaffold_24_13
unknown

Not on your lists

comp(16493..17389)
DNA (897bp) protein (299aa)

This feature has no annotations

04302015_24_scaffold_24_14
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17400..19475)
DNA (2076bp) protein (692aa)
RkpR, polysaccharide export protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZYE7_STAND
RkpR, polysaccharide export protein; K10107 capsular polysaccharide transport system permease protein
RkpR, polysaccharide export protein {ECO:0000313|EMBL:ADH89059.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
04302015_24_scaffold_24_15
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19475..20158)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003764118
ABC transporter-like protein; K09689 capsular polysaccharide transport system ATP-binding protein
ABC transporter related {ECO:0000313|EMBL:ACK51652.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
04302015_24_scaffold_24_16
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20155..20460)
DNA (306bp) protein (102aa)
ABC-2 type transporter n=2 Tax=Sinorhizobium medicae RepID=A6UJF4_SINMW
ABC-2 type transporter; K09688 capsular polysaccharide transport system permease protein
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
04302015_24_scaffold_24_17
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21110..23236)
DNA (2127bp) protein (709aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:KCV60937.1}; EC=2.4.-.- {ECO:0000313|EMBL:KCV60937.1};; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
Capsular polysaccharide biosynthesis protein n=2 Tax=Bordetella bronchiseptica RepID=K4T1K6_BORBO rbh
wbpT; capsular polysaccharide biosynthesis protein rbh
04302015_24_scaffold_24_18
Komagataeibacter xylinus, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23249..24256)
DNA (1008bp) protein (336aa)
UDP-glucuronate 5'-epimerase; K08679 UDP-glucuronate 4-epimerase [EC:5.1.3.6]
UDP-glucuronate 5-epimerase n=1 Tax=Gluconacetobacter oboediens RepID=UPI000237F1CE rbh
UDP-N-acetylglucosamine 4-epimerase {ECO:0000313|EMBL:GAN99061.1}; TaxID=1234668 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter xylinus NBRC 13693.;"
04302015_24_scaffold_24_19
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24331..25713)
DNA (1383bp) protein (461aa)
Nucleotide sugar dehydrogenase family protein n=1 Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KR08_MICAA rbh
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:EZQ13307.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
nucleotide sugar dehydrogenase family protein rbh
04302015_24_scaffold_24_20
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27101..28126)
DNA (1026bp) protein (342aa)
Capsule polysaccharide transporter n=2 Tax=Labrenzia RepID=U7GHF8_9RHOB
Capsule polysaccharide transporter {ECO:0000313|EMBL:ERP96897.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
capsule polysaccharide exporter protein; K01991 polysaccharide export outer membrane protein
04302015_24_scaffold_24_21
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29622..37049
DNA (7428bp) protein (2476aa)
Fatty acid synthase transmembrane protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NU18_9RHOB rbh
Fatty acid synthase transmembrane protein {ECO:0000313|EMBL:EAV43927.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
Fatty acid synthase transmembrane protein rbh
04302015_24_scaffold_24_22
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37046..38401
DNA (1356bp) protein (452aa)
Acyl-transferase transferase protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J5V6_POLGS rbh
acyltransferase rbh
Acyl-transferase transferase protein {ECO:0000313|EMBL:ADZ71210.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
04302015_24_scaffold_24_23
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38408..39178
DNA (771bp) protein (257aa)
Putative short-chain dehydrogenase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IG48_AZOC5
short-chain dehydrogenase
Putative short-chain dehydrogenase {ECO:0000313|EMBL:BAF86036.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
04302015_24_scaffold_24_24
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39225..39917
DNA (693bp) protein (231aa)
Putative CDP-alcohol phosphatidyltransferase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IG68_AZOC5
CDP-alcohol phosphatidyltransferase
Putative CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:BAF86046.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
04302015_24_scaffold_24_25
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39961..41244
DNA (1284bp) protein (428aa)
UDP-glucose/GDP-mannose dehydrogenase n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2LR81_9PROT rbh
UDP-glucose/GDP-mannose dehydrogenase family protein; putative Capsular polysaccharide biosynthesis protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
04302015_24_scaffold_24_26
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41272..42288)
DNA (1017bp) protein (339aa)
Transglutaminase-like n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AF81_AZOBR rbh
transglutaminase-like rbh
Transglutaminase-like {ECO:0000313|EMBL:CCC96430.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
04302015_24_scaffold_24_27
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42366..43163)
DNA (798bp) protein (266aa)
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA {ECO:0000256|HAMAP-Rule:MF_00905}; Short=3',5'-cyclic AMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; Short=cAMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; EC=3.1.4.17 {ECO:0000256|HAMAP-Rule:MF_00905};; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TIP1_TISMK rbh
metallophosphoesterase rbh
04302015_24_scaffold_24_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43164..43814)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P538_AZOS1
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
04302015_24_scaffold_24_29
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43862..45235
DNA (1374bp) protein (458aa)
amidase (EC:3.5.1.4); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] rbh
amidotransferase n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI00035D0BC3 rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
04302015_24_scaffold_24_30
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45263..45523
DNA (261bp) protein (87aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 1-30 of 169 in total

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