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04302015_24_scaffold_27

Search features with annotation key words

Displaying items 1-30 of 173 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_24_scaffold_27_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..371
DNA (369bp) protein (123aa)
TISRso5 ISRSO5-transposase protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFX9_NITHX
tISRso5; ISRSO5-transposase protein
TISRso5 ISRSO5-transposase protein {ECO:0000313|EMBL:ABE64868.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
04302015_24_scaffold_27_2
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

437..766
DNA (330bp) protein (110aa)
UPI0003D5B9C5 related cluster n=1 Tax=unknown RepID=UPI0003D5B9C5
Uncharacterized protein {ECO:0000313|EMBL:AKH43044.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein; K09771 hypothetical protein
04302015_24_scaffold_27_3
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(849..1667)
DNA (819bp) protein (273aa)
Putative purine-nucleoside phosphorylase id=4918045 bin=GWA2_Elusimicrobia_66_18 species=Roseovarius sp. 217 genus=Roseovarius taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum rbh
purine or other phosphorylase family 1 rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
04302015_24_scaffold_27_4
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1691..2428)
DNA (738bp) protein (246aa)
Methyltransferase type 11 n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7Q3D6_METSZ
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:CCJ05589.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
04302015_24_scaffold_27_5
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2529..2882)
DNA (354bp) protein (118aa)
DsrE family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V498_9BRAD
DsrE family protein {ECO:0000313|EMBL:EFI52778.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
DsrE family protein; K06039 uncharacterized protein involved in oxidation of intracellular sulfur
04302015_24_scaffold_27_6
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2912..3271)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KYE6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPC00389.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;"
hypothetical protein; K08982 putative membrane protein
04302015_24_scaffold_27_7
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3333..4334)
DNA (1002bp) protein (334aa)
sulfurtransferase n=1 Tax=Thioalkalivibrio sp. ALJ6 RepID=UPI00037D95A3 rbh
TVP38/TMEM64 family membrane protein {ECO:0000313|EMBL:GAK34395.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
ydjX_[C]; SNARE associated golgi family protein rbh
04302015_24_scaffold_27_8
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4331..5218)
DNA (888bp) protein (296aa)
Fatty acid hydroxylase n=1 Tax=Oceanibaculum indicum P24 RepID=K2IYG8_9PROT rbh
Fatty acid hydroxylase {ECO:0000313|EMBL:EKE67948.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
sterol desaturase rbh
04302015_24_scaffold_27_9
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5266..5940
DNA (675bp) protein (225aa)
Sulfurtransferase n=1 Tax=Oceanibaculum indicum P24 RepID=K2IZG3_9PROT rbh
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
ArsR family transcriptional regulator rbh
04302015_24_scaffold_27_10
Mesorhizobium sp. LSJC265A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5957..6949)
DNA (993bp) protein (331aa)
integrase n=1 Tax=Rhizobium mongolense RepID=UPI0003B44010 rbh
Integrase {ECO:0000313|EMBL:ESX09656.1}; TaxID=1287322 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC265A00.;"
integrase catalytic subunit rbh
04302015_24_scaffold_27_11
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7228..8433)
DNA (1206bp) protein (402aa)
Integrase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B9W4_9RHIZ rbh
integrase rbh
Integrase {ECO:0000313|EMBL:AGK59813.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
04302015_24_scaffold_27_12
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8645..9487)
DNA (843bp) protein (281aa)
UPI0003CE9BC1 related cluster n=1 Tax=unknown RepID=UPI0003CE9BC1
Uncharacterized protein {ECO:0000313|EMBL:CCQ74766.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
DNA repair protein RadC; K03630 DNA repair protein RadC
04302015_24_scaffold_27_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9555..10985
DNA (1431bp) protein (477aa)
Beta-lactamase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RG45_PHEZH rbh
beta-lactamase rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
04302015_24_scaffold_27_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11010..11882)
DNA (873bp) protein (291aa)
map; methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] rbh
Methionine aminopeptidase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IWS6_RHOCS rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
04302015_24_scaffold_27_15
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11995..12756
DNA (762bp) protein (254aa)
Molybdopterin binding domain protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NXN9_AZOS1
molybdopterin binding domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
04302015_24_scaffold_27_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12812..13876
DNA (1065bp) protein (355aa)
Membrane protein AbrB duplication n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IGP0_BEII9 rbh
membrane protein; K07120 rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
04302015_24_scaffold_27_17
unknown

Not on your lists

comp(13882..14763)
DNA (882bp) protein (294aa)

This feature has no annotations

04302015_24_scaffold_27_18
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14820..16127)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CME8_9RHIZ rbh
DNA-binding protein {ECO:0000313|EMBL:ETR78354.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
HlyC/CorC family transporter; K03699 putative hemolysin rbh
04302015_24_scaffold_27_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16247..17641
DNA (1395bp) protein (465aa)
Putative amidase n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XUR0_ALCXX
putative amidase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
04302015_24_scaffold_27_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17812..18519
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EC21B5
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
04302015_24_scaffold_27_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18470..19405)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HN98_9PROT
hypothetical protein; K03453 bile acid:Na+ symporter, BASS family
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
04302015_24_scaffold_27_22
unknown

Not on your lists

19440..19994
DNA (555bp) protein (185aa)

This feature has no annotations

04302015_24_scaffold_27_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20057..20515
DNA (459bp) protein (153aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
04302015_24_scaffold_27_24
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20528..22507)
DNA (1980bp) protein (660aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Pseudomonas stutzeri DSM 10701 RepID=I7A0K5_PSEST rbh
multi-sensor hybrid histidine kinase rbh
Uncharacterized protein {ECO:0000313|EMBL:AFN77929.1}; TaxID=1123519 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri DSM 10701.;"
04302015_24_scaffold_27_25
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(22504..24255)
DNA (1752bp) protein (584aa)
Histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INY7_KORVE rbh
histidine kinase rbh
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
04302015_24_scaffold_27_26
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24252..25262)
DNA (1011bp) protein (337aa)
Stage II sporulation protein E id=4374371 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative anti-sigma regulatory factor
Putative anti-sigma regulatory factor {ECO:0000313|EMBL:BAL75666.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
04302015_24_scaffold_27_27
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25259..25660)
DNA (402bp) protein (134aa)
Putative anti-sigma regulatory factor, serine/threonine protein kinase n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LWC4_METRJ
putative anti-sigma regulatory factor
Putative anti-sigma regulatory factor, serine/threonine protein kinase {ECO:0000313|EMBL:ACB27187.1}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
04302015_24_scaffold_27_28
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25644..26033)
DNA (390bp) protein (130aa)
Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I068_9BRAD
Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) {ECO:0000313|EMBL:EJN10963.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
anti-sigma-factor antagonist
04302015_24_scaffold_27_29
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26044..26934)
DNA (891bp) protein (297aa)
Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CR69_9BRAD
Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) {ECO:0000313|EMBL:EJN10964.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
anti-sigma-factor antagonist
04302015_24_scaffold_27_30
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27154..28683
DNA (1530bp) protein (510aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 1-30 of 173 in total

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