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04302015_24_scaffold_101

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Displaying items 1-30 of 126 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_24_scaffold_101_1
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

153..1232
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000374FD4F rbh
hypothetical protein rbh
Tax=GWA2_Rhodocyclales_65_20_curated
04302015_24_scaffold_101_2
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1223..2089
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0G009_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EOA02317.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;"
hypothetical protein rbh
04302015_24_scaffold_101_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2437..3777)
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000371D72A rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG10203.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
UBA/ThiF-type NAD/FAD binding fold containing protein
04302015_24_scaffold_101_4
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3774..4298)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI00035F5B66
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
04302015_24_scaffold_101_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4246..4743)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003690675
Uncharacterized protein {ECO:0000313|EMBL:CEG10201.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
04302015_24_scaffold_101_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4736..5284)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000378850C
Uncharacterized protein {ECO:0000313|EMBL:CEG10200.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
04302015_24_scaffold_101_7
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5440..5826
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5ASL4_METEA
Uncharacterized protein {ECO:0000313|EMBL:AJE45030.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
hypothetical protein
04302015_24_scaffold_101_8
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5826..6536
DNA (711bp) protein (237aa)
Uncharacterized protein n=2 Tax=Sphingobium RepID=T0H0E5_9SPHN
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
04302015_24_scaffold_101_9
Leptospirillum sp. Group II 'C75', Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

6570..9968
DNA (3399bp) protein (1133aa)
Uncharacterized protein n=1 Tax=Leptospirillum sp. Group II 'C75' RepID=U4QVD0_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EIJ77001.1}; TaxID=1159328 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum sp. Group II 'C75'.;"
hypothetical protein; K06860 uncharacterized protein rbh
04302015_24_scaffold_101_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10116..10520)
DNA (405bp) protein (135aa)
Transposase, mutator type n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20ZH1_RHOPB
transposase, mutator type
Transposase, mutator type {ECO:0000313|EMBL:ABD89465.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
04302015_24_scaffold_101_11
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10975..11184
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S713_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD89990.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
hypothetical protein
04302015_24_scaffold_101_12
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11181..12476)
DNA (1296bp) protein (432aa)
Symbiosis island integrase n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z1K1_9BRAD rbh
symbiosis island integrase rbh
Symbiosis island integrase {ECO:0000313|EMBL:BAM86834.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
04302015_24_scaffold_101_trna_2
unknown

Not on your lists

comp(12681..12753)
DNA (73bp)
transferRNA
04302015_24_scaffold_101_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12755..14341
DNA (1587bp) protein (529aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HIN8_9BRAD rbh
lldP; L-lactate permease; K03303 lactate transporter, LctP family rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
04302015_24_scaffold_101_14
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14471..15370
DNA (900bp) protein (300aa)
Peptidase S1 and S6 chymotrypsin/Hap n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AC05_9PROT
Peptidase S1 and S6 chymotrypsin/Hap {ECO:0000313|EMBL:EME70323.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
04302015_24_scaffold_101_15
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15567..16244)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2T6T5_BURPP
Uncharacterized protein {ECO:0000313|EMBL:AJZ56683.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
hypothetical protein
04302015_24_scaffold_101_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16481..17350
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00037D966C
oxidoreductase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
04302015_24_scaffold_101_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17361..17993
DNA (633bp) protein (211aa)
Glutathione S-transferase, N-terminal domain n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1AY32_PARDP
glutathione S-transferase domain-containing protein; K11208 GST-like protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
04302015_24_scaffold_101_18
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17990..18973
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI000367D2FD
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AGW94084.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
hypothetical protein rbh
04302015_24_scaffold_101_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19143..19397)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ANB3_AZOBR
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
04302015_24_scaffold_101_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19574..20389
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002ECB449
putative Zn-dependent hydrolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
04302015_24_scaffold_101_21
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20419..20949
DNA (531bp) protein (177aa)
deaminase reductase n=1 Tax=Rhizobium gallicum RepID=UPI000374667C rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCE94770.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
04302015_24_scaffold_101_22
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20982..21878)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DQC9_BRAJP rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAL11650.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
04302015_24_scaffold_101_23
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22015..22998
DNA (984bp) protein (328aa)
Transcriptional regulator n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IUX6_9BURK rbh
LacI family transcriptional regulator; K06145 LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor rbh
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
04302015_24_scaffold_101_24
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23008..23790
DNA (783bp) protein (261aa)
putative short-chain alcohol dehydrogenase (EC:1.1.1.30); K00019 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
Uncharacterized protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IUX5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIF34527.1}; Flags: Precursor;; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;"
04302015_24_scaffold_101_25
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23873..24961
DNA (1089bp) protein (363aa)
Uncharacterized protein n=34 Tax=Bordetella RepID=F4LHJ8_BORPC rbh
hypothetical protein rbh
Putative exported protein {ECO:0000313|EMBL:CCN22876.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;"
04302015_24_scaffold_101_26
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25048..25497)
DNA (450bp) protein (150aa)
ribH2; riboflavin synthase subunit beta (EC:2.5.1.9); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|SAAS:SAAS00106234}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|SAAS:SAAS00106234};; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (st
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Rhizobium etli (strain CFN 42 / ATCC 51251) RepID=Q2K6S7_RHIEC
04302015_24_scaffold_101_27
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25762..27357)
DNA (1596bp) protein (532aa)
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein id=2476385 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oligopeptide ABC transporter periplasmic oligopeptide-binding protein; K02035 peptide/nickel transport system substrate-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
04302015_24_scaffold_101_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27459..28643)
DNA (1185bp) protein (395aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2]
Ferredoxin--NADP(+) reductase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H0D3_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
04302015_24_scaffold_101_29
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28672..29130
DNA (459bp) protein (153aa)
7-cyano-7-deazaguanine reductase; K09457 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=QUEF_MAGSA
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 1-30 of 126 in total

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