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04302015_24_scaffold_452

Search features with annotation key words

Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_24_scaffold_452_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(276..1172)
DNA (897bp) protein (299aa)
LysR family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRX6_9RHIZ rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EHK56531.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
LysR family transcriptional regulator rbh
04302015_24_scaffold_452_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1271..1663
DNA (393bp) protein (131aa)
Blr5558 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89IS6_BRADU
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
04302015_24_scaffold_452_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1663..2583
DNA (921bp) protein (307aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRX4_9RHIZ rbh
pyridoxamine 5'-phosphate oxidase-like protein; K07006 rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
04302015_24_scaffold_452_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(2594..3031)
DNA (438bp) protein (146aa)
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase id=4954846 bin=GWC2_Methylomirabilis_70_24 species=Burkholderia sp. H160 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWC2_Rokubacteria_70_16_curated
04302015_24_scaffold_452_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3086..4537)
DNA (1452bp) protein (484aa)
glutamate synthase (NADH) small subunit (EC:1.4.1.14); K00266 glutamate synthase (NADPH/NADH) small chain [EC:1.4.1.13 1.4.1.14] rbh
dihydropyrimidine dehydrogenase subunit A n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A94006 rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
04302015_24_scaffold_452_6
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4603..9243)
DNA (4641bp) protein (1547aa)
glutamate synthase (NADH) large subunit (EC:1.4.1.14); K00265 glutamate synthase (NADPH/NADH) large chain [EC:1.4.1.13 1.4.1.14] rbh
Glutamate synthase (NADH) large subunit n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V2X0_SPHWW rbh
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
04302015_24_scaffold_452_7
unknown

Not on your lists

comp(9373..10020)
DNA (648bp) protein (216aa)

This feature has no annotations

04302015_24_scaffold_452_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10130..10414
DNA (285bp) protein (95aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
04302015_24_scaffold_452_9
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10430..13849)
DNA (3420bp) protein (1140aa)
Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:KJB96321.1}; EC=1.2.1.88 {ECO:0000313|EMBL:KJB96321.1};; EC=1.5.5.2 {ECO:0000313|EMBL:KJB96321.1};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
delta-1-pyrroline-5-carboxylate dehydrogenase; K13821 proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.99.8 1.5.1.12]
Trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JW68_9PROT
04302015_24_scaffold_452_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13862..14266)
DNA (405bp) protein (135aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0B5_9BRAD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
04302015_24_scaffold_452_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14346..16814
DNA (2469bp) protein (823aa)
hrpB; ATP-dependent helicase; K03579 ATP-dependent helicase HrpB [EC:3.6.4.13] rbh
ATP-dependent helicase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z2H5_AZOL4 rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
04302015_24_scaffold_452_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17016..17225)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Streptomyces coelicoflavus ZG0656 RepID=H1QFJ4_9ACTO
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
04302015_24_scaffold_452_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17315..18772
DNA (1458bp) protein (486aa)
amidase; K01426 amidase [EC:3.5.1.4] rbh
Amidase n=1 Tax=Oceanibaculum indicum P24 RepID=K2II91_9PROT rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
04302015_24_scaffold_452_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18787..19314
DNA (528bp) protein (176aa)
apt; adenine phosphoribosyltransferase (EC:2.4.2.7); K00759 adenine phosphoribosyltransferase [EC:2.4.2.7]
Adenine phosphoribosyltransferase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=APT_RHOCS
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 14 items

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