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04302015_24_scaffold_111

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Displaying items 1-30 of 70 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_24_scaffold_111_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1..612)
DNA (612bp) protein (204aa)
ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12]
ATP-dependent DNA helicase RecG n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCR7_NIAKG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_111_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

632..1642
DNA (1011bp) protein (337aa)
tryptophanyl-tRNA synthetase; K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000382E4B0 rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_111_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1705..2340
DNA (636bp) protein (212aa)
deoxynucleoside kinase n=1 Tax=Niabella aurantiaca RepID=UPI00037071C9 rbh
deoxyadenosine kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_111_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

2315..2722
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH61_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_111_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2791..4431)
DNA (1641bp) protein (547aa)
phosphoenolpyruvate carboxykinase; K01610 phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] rbh
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH96_NIAKG rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_111_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

4517..5941
DNA (1425bp) protein (475aa)
dehydrogenase n=1 Tax=Niabella aurantiaca RepID=UPI000362F8B8 rbh
FAD/FMN-dependent dehydrogenase rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_111_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5965..6561
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036D245F
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_111_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(6542..7081)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003677546
hypothetical protein; K06966
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_111_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7160..8614
DNA (1455bp) protein (485aa)
Na+/solute symporter n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PPX5_CHIPD rbh
Na+/solute symporter rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_111_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8601..9239
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003773A1F
O-methyltransferase family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_111_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9236..10306
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036A6277 rbh
Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_111_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10309..10851
DNA (543bp) protein (181aa)
hypoxanthine phosphoribosyltransferase; K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000362FF84
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_111_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10844..12595
DNA (1752bp) protein (584aa)
von Willebrand factor type A n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIC4_NIAKG
von Willebrand factor type A
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_111_14
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12602..13633)
DNA (1032bp) protein (344aa)
id=4161677 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
Tax=GWF2_Bacteroidetes_41_31_curated
04302015_24_scaffold_111_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(13710..14372)
DNA (663bp) protein (221aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IID6_FLUTR
LuxR family two component transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_111_16
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

comp(14421..17342)
DNA (2922bp) protein (974aa)
Putative periplasmic ligand-binding sensor domain protein id=3975541 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
04302015_24_scaffold_111_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(17387..18559)
DNA (1173bp) protein (391aa)
molecular chaperone DnaJ n=1 Tax=Segetibacter koreensis RepID=UPI00037F3AAD rbh
chaperone protein dnaJ; K03686 molecular chaperone DnaJ
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_111_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(18575..19237)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003827B0B
protein grpE; K03687 molecular chaperone GrpE
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_111_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

19238..20413
DNA (1176bp) protein (392aa)
PUA domain containing protein; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
SAM-dependent methyltransferase n=1 Tax=Segetibacter koreensis RepID=UPI00036170B8 rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_111_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(20426..20785)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037EB9CC
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_111_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(20894..21364)
DNA (471bp) protein (157aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PR63_CHIPD
alkyl hydroperoxide reductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_111_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(21442..22098)
DNA (657bp) protein (219aa)
3-oxoacid CoA-transferase subunit B; K01029 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] rbh
3-oxoacid CoA-transferase, B subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRC4_CHIPD rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_111_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(22130..22822)
DNA (693bp) protein (231aa)
3-oxoacid CoA-transferase subunit A; K01028 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] rbh
3-oxoacid CoA-transferase, A subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRC5_CHIPD rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_111_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(22822..23181)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003808869
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_111_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(23178..24104)
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F8AC1 rbh
hypothetical protein rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_111_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(24191..24535)
DNA (345bp) protein (115aa)
DNA-directed RNA polymerase subunit omega n=1 Tax=Segetibacter koreensis RepID=UPI000382E9B0
DNA-directed RNA polymerase subunit omega
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_111_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(24528..25334)
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035E7F35 rbh
outer membrane assembly lipoprotein YfiO; K05807 putative lipoprotein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_111_28
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


comp(25478..27370)
DNA (1893bp) protein (631aa)
30S ribosomal protein S1 n=1 Tax=Segetibacter koreensis RepID=UPI00035FE542
RNA binding S1 domain-containing protein; K02945 small subunit ribosomal protein S1
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_111_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

27602..27934
DNA (333bp) protein (111aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_111_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

27972..28301
DNA (330bp) protein (110aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 70 in total

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