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04302015_24_scaffold_315

Search features with annotation key words

Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_24_scaffold_315_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2..346)
DNA (345bp) protein (115aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_315_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(404..1051)
DNA (648bp) protein (216aa)
ABC transporter related protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRU0_NIAKG
ABC transporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_315_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1051..2775)
DNA (1725bp) protein (575aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NR25_9SPHI
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_315_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2835..5807)
DNA (2973bp) protein (991aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003690C6B rbh
beta-glucosidase-like glycosyl hydrolase rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_315_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5850..6254)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036C821A
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_315_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(6308..6952)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003763C39 rbh
thioredoxin; K07396 putative protein-disulfide isomerase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_315_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7017..8219
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037CE48A
putative PLP-dependent enzyme possibly involved in cell wall biogenesis rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_315_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8220..8507)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003639A01
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_315_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8555..10045
DNA (1491bp) protein (497aa)
RNA polymerase, sigma 54 subunit, RpoN/SigL n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB80_NIAKG rbh
RNA polymerase, sigma 54 subunit, RpoN/SigL; K03092 RNA polymerase sigma-54 factor rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_315_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10055..10759
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036636E8
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_315_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10817..13147
DNA (2331bp) protein (777aa)
Exporter of the RND superfamily protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMI3_NIAKG rbh
RND superfamily exporter rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_315_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

13253..16387
DNA (3135bp) protein (1045aa)
TonB-dependent receptor plug n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K999_9BACT rbh
TonB-dependent receptor plug rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_315_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16412..17872
DNA (1461bp) protein (487aa)
Putative outer membrane protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GWI4_9SPHI rbh
RagB/SusD domain protein rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_315_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

18181..21261
DNA (3081bp) protein (1027aa)
membrane protein n=1 Tax=Pedobacter agri RepID=UPI00029AD74A rbh
tonb-dependent receptor plug rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_315_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

21308..22735
DNA (1428bp) protein (476aa)
membrane protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B4DA84 rbh
ragb/susd domain protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_315_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(22892..24031)
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003789498 rbh
alkyl hydroperoxide reductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_315_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(24041..25486)
DNA (1446bp) protein (482aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003784491
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_315_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


comp(25486..26607)
DNA (1122bp) protein (374aa)
alaS; alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7]
alanyl-tRNA synthetase n=1 Tax=Niabella aurantiaca RepID=UPI00037DF87B
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 18 items

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