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04302015_24_scaffold_362

Search features with annotation key words

Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_24_scaffold_362_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

366..1610
DNA (1245bp) protein (415aa)
cellobiohydrolase A
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_362_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1620..2858
DNA (1239bp) protein (413aa)
PKD domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_362_3
unknown

Not on your lists

2970..3368
DNA (399bp) protein (133aa)

This feature has no annotations

04302015_24_scaffold_362_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3477..5129
DNA (1653bp) protein (551aa)
Putative aminopeptidase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KRK5_SOLCM rbh
putative aminopeptidase rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_362_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5126..6076
DNA (951bp) protein (317aa)
Pyridoxal-5'-phosphate-dependent protein beta subunit n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EYK0_EMTOG rbh
Pyridoxal-5'-phosphate-dependent protein beta subunit rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_362_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6082..7770
DNA (1689bp) protein (563aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003633774
glucose-methanol-choline oxidoreductase rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_362_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(7774..8589)
DNA (816bp) protein (272aa)
Putative uncharacterized protein n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5SUY8_9GAMM
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_362_8
RIFOXYB2_FULL_Gammaproteobacteria_38_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8659..10440)
DNA (1782bp) protein (594aa)
gamma-glutamyltransferase; K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003779052
Tax=RIFOXYB2_FULL_Gammaproteobacteria_38_6_curated
04302015_24_scaffold_362_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10451..12943
DNA (2493bp) protein (831aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003816385
peptidase M14 carboxypeptidase A
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_362_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(13050..15410)
DNA (2361bp) protein (787aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000374E8F3
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_362_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15659..16387
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036CDE54
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_362_trna_1
unknown

Not on your lists

16446..16517
DNA (72bp)
transferRNA
04302015_24_scaffold_362_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16616..17488
DNA (873bp) protein (291aa)
GTPase Era n=1 Tax=Niabella soli DSM 19437 RepID=H1NL57_9SPHI rbh
GTP-binding protein Era-like-protein; K03595 GTP-binding protein Era rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_362_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

17524..18837
DNA (1314bp) protein (438aa)
GTP-binding protein Der n=1 Tax=Segetibacter koreensis RepID=UPI00036E6C29
GTP-binding protein engA; K03977 GTP-binding protein rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_362_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

18937..19119
DNA (183bp) protein (61aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_362_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

19315..21717
DNA (2403bp) protein (801aa)
anti-sigma H sporulation factor LonB; K01338 ATP-dependent Lon protease [EC:3.4.21.53] rbh
Lon protease n=1 Tax=Segetibacter koreensis RepID=UPI0003775CD3 rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_362_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

21736..22761
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPY9_NIAKG rbh
hypothetical protein rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_362_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(22796..23713)
DNA (918bp) protein (306aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
Aldehyde Dehydrogenase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAD9_CHIPD
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_362_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(23661..24329)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000372E422
L-aminoadipate-semialdehyde dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_362_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(24380..25078)
DNA (699bp) protein (233aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EGK4_RUNSL
LytTR family two component transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_362_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(25075..26166)
DNA (1092bp) protein (364aa)
Putative signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB58_NIAKG
putative signal transduction histidine kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_362_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(26247..27128)
DNA (882bp) protein (294aa)
Ppx/GppA phosphatase; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003796672
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_362_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(27109..29202)
DNA (2094bp) protein (698aa)
polyphosphate kinase 1; K00937 polyphosphate kinase [EC:2.7.4.1] rbh
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000360A426 rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_362_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(29255..29752)
DNA (498bp) protein (166aa)
rfaE bifunctional protein; K03272 D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000368EA9D
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_362_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(29739..30752)
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037519BC rbh
hypothetical protein; K07027 rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_362_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

30924..31742
DNA (819bp) protein (273aa)
starch synthase; K00703 starch synthase [EC:2.4.1.21] rbh
starch synthase n=1 Tax=Segetibacter koreensis RepID=UPI000382E341 rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_362_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

31752..33236
DNA (1485bp) protein (495aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003685381 rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_362_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

33267..33476
DNA (210bp) protein (70aa)
metK; S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6]
S-adenosylmethionine synthetase n=1 Tax=Niabella aurantiaca RepID=UPI00036EDA83
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 28 items

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