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04302015_24_scaffold_162

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_24_scaffold_162_1
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(187..2319)
DNA (2133bp) protein (711aa)
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI0002DD9C36 rbh
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
04302015_24_scaffold_162_2
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2490..3485
DNA (996bp) protein (332aa)
cysteine synthase A (EC:2.5.1.47); K01738 cysteine synthase A [EC:2.5.1.47] rbh
Cysteine synthase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0JBI1_9SPHN rbh
Cysteine synthase {ECO:0000313|EMBL:EQB19269.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
04302015_24_scaffold_162_3
unknown

Not on your lists

3515..3790
DNA (276bp) protein (92aa)

This feature has no annotations

04302015_24_scaffold_162_4
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3799..4629
DNA (831bp) protein (277aa)
ABC transporter n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B5B47E
Uncharacterized protein {ECO:0000313|EMBL:AHE51904.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein
04302015_24_scaffold_162_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4918..5424
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B38BED
Cell division protein mraZ {ECO:0000313|EMBL:GAO56990.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
04302015_24_scaffold_162_6
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5421..6377
DNA (957bp) protein (319aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
16S rRNA methyltransferase n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B3C363 rbh
16S rRNA m(4)C1402 methyltransferase rbh
04302015_24_scaffold_162_7
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6374..7015
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B73E48
Uncharacterized protein {ECO:0000313|EMBL:ESZ88378.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
hypothetical protein
04302015_24_scaffold_162_8
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7015..8751
DNA (1737bp) protein (579aa)
peptidoglycan glycosyltransferase; K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] rbh
peptidoglycan glycosyltransferase n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B3AE4B rbh
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
04302015_24_scaffold_162_9
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8751..10178
DNA (1428bp) protein (476aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13); K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] rbh
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI000317761B rbh
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
04302015_24_scaffold_162_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10175..11560
DNA (1386bp) protein (462aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] rbh
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W5V6_9SPHN rbh
04302015_24_scaffold_162_11
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11560..12630
DNA (1071bp) protein (357aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13) rbh
phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CD469 rbh
04302015_24_scaffold_162_12
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12627..13916
DNA (1290bp) protein (430aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|RuleBase:RU003664}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|RuleBase:RU003664};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9); K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] rbh
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZD54_9SPHN rbh
04302015_24_scaffold_162_13
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13913..15127
DNA (1215bp) protein (405aa)
cell division protein FtsW n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B58697 rbh
Cell cycle protein {ECO:0000313|EMBL:KGB52443.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
cell cycle protein; K03588 cell division protein FtsW rbh
04302015_24_scaffold_162_14
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15133..16311
DNA (1179bp) protein (393aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummarien
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] rbh
UDP-diphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B33486 rbh
04302015_24_scaffold_162_15
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16311..17717
DNA (1407bp) protein (469aa)
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8) rbh
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
UDP-N-acetylmuramate--alanine ligase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489353 rbh
04302015_24_scaffold_162_16
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17714..18610
DNA (897bp) protein (299aa)
murB; UDP-N-acetylenolpyruvoylglucosamine reductase; K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] rbh
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0J529_9SPHN rbh
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
04302015_24_scaffold_162_17
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18607..19530
DNA (924bp) protein (308aa)
ddl; D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] rbh
D-alanine--D-alanine ligase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=DDL_SPHAL rbh
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
04302015_24_scaffold_162_18
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19530..20444
DNA (915bp) protein (305aa)
cell division protein FtsQ n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B4A6D9 rbh
ftsQ; cell division protein FtsQ; K03589 cell division protein FtsQ
Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
04302015_24_scaffold_162_19
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20441..21706
DNA (1266bp) protein (422aa)
cell division protein FtsA n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B4776C rbh
cell division protein FtsA; K03590 cell division protein FtsA rbh
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
04302015_24_scaffold_162_20
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21811..23307
DNA (1497bp) protein (499aa)
cell division protein FtsZ n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B32242 rbh
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
cell division protein FtsZ; K03531 cell division protein FtsZ rbh
04302015_24_scaffold_162_21
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23414..25057
DNA (1644bp) protein (548aa)
hypothetical protein n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B36C40
Sporulation related protein {ECO:0000313|EMBL:KGB58103.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
sporulation related protein
04302015_24_scaffold_162_22
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25095..26246
DNA (1152bp) protein (384aa)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein; K01129 dGTPase [EC:3.1.5.1] rbh
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0H9P4_9SPHN rbh
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
04302015_24_scaffold_162_23
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26243..26899
DNA (657bp) protein (219aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GRY8_SPHAL
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AJA09834.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
NAD-dependent epimerase/dehydratase
04302015_24_scaffold_162_24
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27205..28353
DNA (1149bp) protein (383aa)
Aminomethyltransferase {ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|RuleBase:RU003981};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
gcvT; glycine cleavage system aminomethyltransferase T; K00605 aminomethyltransferase [EC:2.1.2.10] rbh
Aminomethyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGU7_9SPHN rbh
04302015_24_scaffold_162_25
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28350..28721
DNA (372bp) protein (124aa)
Glycine cleavage system H protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GRZ0_SPHAL
glycine cleavage system protein H; K02437 glycine cleavage system H protein
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
04302015_24_scaffold_162_26
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28759..30117
DNA (1359bp) protein (453aa)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796};; Glycine cleavage system P-protein subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine decarboxylase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine dehydrogenase (aminomethyl-transferring) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria;
gcvPA; glycine dehydrogenase subunit 1 (EC:1.4.4.2); K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2] rbh
glycine dehydrogenase subunit 1 n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC01B rbh
04302015_24_scaffold_162_27
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30114..31685
DNA (1572bp) protein (524aa)
glycine dehydrogenase subunit 2; K00283 glycine dehydrogenase subunit 2 [EC:1.4.4.2] rbh
Glycine dehydrogenase (Decarboxylating) beta subunit n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GRZ3_SPHAL rbh
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
04302015_24_scaffold_162_28
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31682..32311
DNA (630bp) protein (210aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IM23_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65278.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
04302015_24_scaffold_162_29
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32513..33478)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0002D96CDE rbh
alpha/beta hydrolase
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
04302015_24_scaffold_162_30
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33638..34339
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B6C85F rbh
hypothetical protein; K09987 hypothetical protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
Displaying items 1-30 of 40 in total

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