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04302015_24_scaffold_499

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_24_scaffold_499_1
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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319..894
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IWL1_METNO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL62801.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
04302015_24_scaffold_499_2
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1022..2470)
DNA (1449bp) protein (483aa)
Subtilase family n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z5I6_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:KEO87990.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. JL475.;"
peptidase S8/S53 subtilisin kexin sedolisin
04302015_24_scaffold_499_3
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2609..3154
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037A40AF
RNA polymerase sigma70 factor {ECO:0000313|EMBL:AHB48516.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
rpoE6; putative RpoE6 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
04302015_24_scaffold_499_4
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3151..3927
DNA (777bp) protein (259aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z5I3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD60093.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
04302015_24_scaffold_499_5
Lottia gigantea, Lottia, Gastropoda, Mollusca, Metazoa

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3971..4681
DNA (711bp) protein (237aa)
Glutamic acid-rich protein, putative (Fragment) n=1 Tax=Plasmodium yoelii yoelii RepID=Q7RG19_PLAYO
Uncharacterized protein {ECO:0000313|EMBL:ESO97874.1}; TaxID=225164 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia.;" source="Lottia gigantea (Giant owl limpet).;"
glutamic acid-rich protein precursor
04302015_24_scaffold_499_6
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4768..5733
DNA (966bp) protein (322aa)
Putative uncharacterized protein n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z5J2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KEO87994.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. JL475.;"
hypothetical protein
04302015_24_scaffold_499_7
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6126..6674
DNA (549bp) protein (183aa)
Cytochrome b561 n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SA87_9SPHN
Cytochrome b561 {ECO:0000313|EMBL:KEQ55586.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
cytochrome b561
04302015_24_scaffold_499_8
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7495..8454)
DNA (960bp) protein (320aa)
Transcriptional regulator, LysR family n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VJN2_CAUST
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADG10561.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
04302015_24_scaffold_499_9
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8457..10250)
DNA (1794bp) protein (598aa)
Hydrolase CocE/NonD family protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VJN1_CAUST rbh
hydrolase CocE/NonD family protein; K06978 rbh
Hydrolase CocE/NonD family protein {ECO:0000313|EMBL:ADG10560.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
04302015_24_scaffold_499_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10295..11833)
DNA (1539bp) protein (513aa)
Efflux pump component MtrF n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QXI7_BREDI rbh
Efflux pump component MtrF {ECO:0000313|EMBL:EGF95685.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
AbgT transporter; K12942 aminobenzoyl-glutamate transport protein rbh
04302015_24_scaffold_499_11
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11914..14799)
DNA (2886bp) protein (962aa)
TonB-dependent outer membrane receptor n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8GVJ0_CAUCN rbh
TonB-dependent outer membrane receptor rbh
TonB-dependent receptor {ECO:0000313|EMBL:AAK23602.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
04302015_24_scaffold_499_12
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14955..16112
DNA (1158bp) protein (386aa)
Capsule synthesis protein, CapA n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VJM9_CAUST rbh
capsule synthesis protein CapA; K07282 poly-gamma-glutamate synthesis protein (capsule biosynthesis protein) rbh
Capsule synthesis protein, CapA {ECO:0000313|EMBL:ADG10558.1}; Flags: Precursor;; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
04302015_24_scaffold_499_13
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16581..17330)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0J821_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB34101.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
hypothetical protein
04302015_24_scaffold_499_14
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17327..17755)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4C385
UPF0276 protein NMD1_00284 {ECO:0000256|HAMAP-Rule:MF_00697}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein; K09930 hypothetical protein
Displaying 14 items

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