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04302015_24_scaffold_1398

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_24_scaffold_1398_1
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(139..747)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6E7K5_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EDM38891.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
04302015_24_scaffold_1398_2
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(823..1461)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GZC6_FLAPJ
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
04302015_24_scaffold_1398_3
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1474..2361)
DNA (888bp) protein (296aa)
stomatin 2 n=1 Tax=Aquaspirillum serpens RepID=UPI0003B6B6A6
Stomatin 2 {ECO:0000313|EMBL:KHQ94103.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
putative stomatin/prohibitin-family membrane protease subunit YbbK
04302015_24_scaffold_1398_4
Neisseria flavescens, Neisseria, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2374..2799)
DNA (426bp) protein (142aa)
Nodulation efficiency protein D n=1 Tax=Neisseria flavescens SK114 RepID=C5TJP5_NEIFL
Nodulation efficiency protein D {ECO:0000313|EMBL:EER57217.1}; TaxID=596320 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria.;" source="Neisseria flavescens SK114.;"
ybbK; Putative activity regulator of membrane protease YbbK
04302015_24_scaffold_1398_5
RIFOXYA1_FULL_Chromatiales_46_5_curated, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2815..3594)
DNA (780bp) protein (260aa)
putative methyltransferase; K03214 RNA methyltransferase, TrmH family [EC:2.1.1.-]
Methyltransferase (Fragment) n=1 Tax=Plesiomonas shigelloides 302-73 RepID=R8AU55_PLESH
Tax=RIFOXYA1_FULL_Chromatiales_46_5_curated
04302015_24_scaffold_1398_6
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3587..4948)
DNA (1362bp) protein (454aa)
C4-dicarboxylate ABC transporter n=1 Tax=Thiomicrospira arctica RepID=UPI000365F7A9 rbh
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KDN96239.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
TRAP dicarboxylate transporter-DctM subunit rbh
04302015_24_scaffold_1398_7
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4961..5482)
DNA (522bp) protein (174aa)
TRAP-type mannitol/chloroaromatic compound transport system, small permease component n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GRU9_9GAMM
TRAP-type mannitol/chloroaromatic compound transport system, small permease component
TRAP-type mannitol/chloroaromatic compound transport system, small permease component {ECO:0000313|EMBL:AGA89473.1}; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
04302015_24_scaffold_1398_8
R_Gammaproteobacteria_38_11, Gammaproteobacteria, Proteobacteria, Bacteria

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5596..6579
DNA (984bp) protein (328aa)
priA; primosomal protein N'; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-]
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CK91_9BACT
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_38_11_curated
Displaying 8 items

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