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04302015_24_scaffold_1729

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_24_scaffold_1729_1
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..557)
DNA (555bp) protein (185aa)
Permease YjgP/YjgQ family protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCF1_9GAMM
Permease {ECO:0000313|EMBL:AHF01901.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
YjgP/YjgQ family permease; K11720 lipopolysaccharide export system permease protein
04302015_24_scaffold_1729_2
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(717..1796)
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI000370A7DC
permease YjgP/YjgQ; K07091 lipopolysaccharide export system permease protein
YjgP/YjgQ family protein {ECO:0000313|EMBL:ABB42339.1}; Flags: Precursor;; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
04302015_24_scaffold_1729_3
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2049..3542
DNA (1494bp) protein (498aa)
cytosol aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] rbh
Probable cytosol aminopeptidase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DA62_THICA rbh
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
04302015_24_scaffold_1729_4
gamma proteobacterium IMCC2047, Gammaproteobacteria, Proteobacteria, Bacteria

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3539..3949
DNA (411bp) protein (137aa)
Putative ABC transporter2C ATP-binding protein n=1 Tax=gamma proteobacterium IMCC2047 RepID=F3KE10_9GAMM
Putative ABC transporter2C ATP-binding protein {ECO:0000313|EMBL:EGG99393.1}; TaxID=434085 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium IMCC2047.;"
04302015_24_scaffold_1729_5
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4064..5443
DNA (1380bp) protein (460aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9]
valyl-tRNA synthetase n=1 Tax=Thiomicrospira arctica RepID=UPI00037DE965
04302015_24_scaffold_1729_6
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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5544..6824
DNA (1281bp) protein (427aa)
valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9]
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; Flags: Precursor;; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
Valine--tRNA ligase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DA28_THICA
Suspect SCG annotation. See neighboring gene [04302015_24_scaffold_1729_5].
Displaying 6 items

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