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04302015_24_scaffold_119

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Displaying items 1-30 of 79 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_24_scaffold_119_1
Idiomarina sp. A28L, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138..590)
DNA (453bp) protein (151aa)
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003A07546
Serine acetyltransferase {ECO:0000313|EMBL:EGN74614.1}; TaxID=1036674 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina sp. A28L.;"
acetyltransferase
04302015_24_scaffold_119_2
Magnetococcus marinus, Magnetococcus, Magnetococcales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(587..1600)
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI00036095C7 rbh
oxidoreductase domain-containing protein rbh
Oxidoreductase domain protein {ECO:0000313|EMBL:ABK44924.1}; TaxID=156889 species="Bacteria; Proteobacteria; Alphaproteobacteria; Magnetococcales; Magnetococcaceae; Magnetococcus.;" source="Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1).;"
04302015_24_scaffold_119_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1608..2339)
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000382419E rbh
nucleotidyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_119_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2350..3792)
DNA (1443bp) protein (481aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003624EB1 rbh
hypothetical protein rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_119_5
unknown

Not on your lists

comp(3860..4030)
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI000365AB05
04302015_24_scaffold_119_6
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(4097..4822)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI00036B21DE
hypothetical protein
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
04302015_24_scaffold_119_7
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4904..5500)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003644DC1
Uncharacterized protein {ECO:0000313|EMBL:KIC92241.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
04302015_24_scaffold_119_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5575..6006
DNA (432bp) protein (144aa)
SOS response UmuD protein; K03503 DNA polymerase V [EC:3.4.21.-]
SOS response UmuD protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK11_NIAKG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_119_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6019..7299
DNA (1281bp) protein (427aa)
DNA-directed DNA polymerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK10_NIAKG rbh
DNA-directed DNA polymerase; K03502 DNA polymerase V rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_119_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(7300..7854)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KM00_SOLCM
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_119_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8009..8587
DNA (579bp) protein (193aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK08_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW02946.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
04302015_24_scaffold_119_12
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8597..8977
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003751FEB
Uncharacterized protein {ECO:0000313|EMBL:CCH51419.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
04302015_24_scaffold_119_13
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

9024..10307
DNA (1284bp) protein (428aa)
Amidohydrolase id=4817215 bin=GWC2_Ignavibacteria_56_12 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome rbh
amidohydrolase domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
04302015_24_scaffold_119_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10353..11546
DNA (1194bp) protein (398aa)
carB; carbamoyl phosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000371ACD9
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_119_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

11608..13167
DNA (1560bp) protein (520aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037835FD
ComEC/Rec2-like protein; K02238 competence protein ComEC
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_119_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

13174..14697
DNA (1524bp) protein (508aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase; K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] rbh
IMP cyclohydrolase n=1 Tax=Segetibacter koreensis RepID=UPI000378115B rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_119_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

14704..15612
DNA (909bp) protein (303aa)
DMT(Drug/metabolite transporter) superfamily permease n=1 Tax=Flavobacterium sp. CF136 RepID=J3BZ72_9FLAO
putative drug/metabolite-transporting permease
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_119_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(15609..16928)
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00038267FB
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_119_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(16910..18280)
DNA (1371bp) protein (457aa)
iron-sulfur cluster binding protein n=1 Tax=Segetibacter koreensis RepID=UPI00037061D2 rbh
iron-sulfur cluster binding protein rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_119_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(18288..18875)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036BEA20 rbh
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_119_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

18964..19593
DNA (630bp) protein (210aa)
rotA; peptidyl-prolyl cis-trans isomerase A precursor (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase A n=1 Tax=Polaribacter sp. MED152 RepID=A2TZP9_9FLAO
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_119_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(19616..20218)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003744D1C
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_119_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(20236..21579)
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000365DF92 rbh
gliding motility-associated protein GldE rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_119_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21649..22074)
DNA (426bp) protein (142aa)
Single-stranded DNA-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNT5_NIAKG
single-strand binding protein; K03111 single-strand DNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
04302015_24_scaffold_119_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(22180..23220)
DNA (1041bp) protein (347aa)
A/G-specific adenine glycosylase; K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] rbh
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000362C17C
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_119_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

23441..23731
DNA (291bp) protein (97aa)
DNA-binding protein n=1 Tax=Segetibacter koreensis RepID=UPI000373081D
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_119_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

23750..24598
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003765B76 rbh
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_119_28
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

24936..26486
DNA (1551bp) protein (517aa)
ribonuclease, Rne/Rng family; K08301 ribonuclease G [EC:3.1.26.-] rbh
Ribonuclease, Rne/Rng family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNU1_NIAKG rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_119_29
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26709..27596)
DNA (888bp) protein (296aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC89717.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
04302015_24_scaffold_119_30
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27609..29297)
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KTI6_HALH1 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC89718.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein rbh
Displaying items 1-30 of 79 in total

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