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04302015_24_scaffold_146

Search features with annotation key words

Displaying items 1-30 of 45 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_24_scaffold_146_1
unknown

Not on your lists

3..149
DNA (147bp) protein (49aa)

This feature has no annotations

04302015_24_scaffold_146_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(167..1819)
DNA (1653bp) protein (551aa)
beta-lactamase n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C7D8C rbh
beta-lactamase rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_146_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1788..3803)
DNA (2016bp) protein (672aa)
Pyruvate dehydrogenase (acetyl-transferring), 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring); K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] rbh
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000380CF58
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_146_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3819..4586)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037AAAC7
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_146_5
unknown

Not on your lists

comp(4682..4810)
DNA (129bp) protein (43aa)

This feature has no annotations

04302015_24_scaffold_146_6
unknown

Not on your lists

comp(4958..5296)
DNA (339bp) protein (113aa)

This feature has no annotations

04302015_24_scaffold_146_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5475..7322
DNA (1848bp) protein (616aa)
2-oxoacid:acceptor oxidoreductase subunit alpha; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] rbh
2-oxoacid:acceptor oxidoreductase, alpha subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIL5_NIAKG rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_146_8
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7812..8270
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00036B77EA
Strain DSM 12611 Contig07, whole genome shotgun sequence {ECO:0000313|EMBL:KIO53358.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
hypothetical protein
04302015_24_scaffold_146_9
R_RIF_OD1_09_51_10, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

8382..8819
DNA (438bp) protein (146aa)
PhnB protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JS67_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_51_10_curated
04302015_24_scaffold_146_10
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8887..9315
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S8U5_9FLAO
Polyketide cyclase {ECO:0000313|EMBL:KGO93991.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
3-demethylubiquinone-9 3-methyltransferase
04302015_24_scaffold_146_11
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

9318..9677
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NTX2_9SPHI
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
04302015_24_scaffold_146_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(9777..10430)
DNA (654bp) protein (218aa)
endonuclease III; K10773 endonuclease III [EC:4.2.99.18] rbh
Endonuclease III n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNW0_CHIPD rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_146_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(10443..10646)
DNA (204bp) protein (68aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_146_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(10799..11104)
DNA (306bp) protein (102aa)
Septum formation initiator n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KSY0_SOLCM
septum formation initiator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_146_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(11178..12470)
DNA (1293bp) protein (431aa)
enolase; K01689 enolase [EC:4.2.1.11] rbh
enolase n=1 Tax=Niabella aurantiaca RepID=UPI00035E227B
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_146_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12529..13029)
DNA (501bp) protein (167aa)
Putative acetyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD05_GEMAT
putative acetyltransferase
Putative acetyltransferase {ECO:0000313|EMBL:BAH40382.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
04302015_24_scaffold_146_17
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13033..13737)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000374B0BA rbh
Gliding motility protein GldA {ECO:0000313|EMBL:KIC92182.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
gliding motility protein GldA; K09687 antibiotic transport system ATP-binding protein rbh
04302015_24_scaffold_146_18
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13812..14060)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIN1_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC92186.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
04302015_24_scaffold_146_19
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14094..15623)
DNA (1530bp) protein (510aa)
General substrate transporter n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIN2_NIAKG rbh
MFS transporter {ECO:0000313|EMBL:KIC92187.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
general substrate transporter rbh
04302015_24_scaffold_146_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15748..17685
DNA (1938bp) protein (646aa)
acetyl-coenzyme A synthetase; K01895 acetyl-CoA synthetase [EC:6.2.1.1] rbh
acetyl-CoA synthetase n=1 Tax=Segetibacter koreensis RepID=UPI000373590A rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_146_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(17857..18648)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037A9DFE
integral membrane protein TerC
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_146_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(18691..19929)
DNA (1239bp) protein (413aa)
hypothetical protein, partial n=1 Tax=Cytophagales str. B6 RepID=UPI0003B3655E rbh
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_146_23
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19960..21945)
DNA (1986bp) protein (662aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZQ5_PEDHD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU02600.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
04302015_24_scaffold_146_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(22059..24104)
DNA (2046bp) protein (682aa)
Oligopeptide transporter, OPT family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PD75_CHIPD
oligopeptide transporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_146_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(24172..25668)
DNA (1497bp) protein (499aa)
Amino acid/peptide transporter n=1 Tax=Niabella soli DSM 19437 RepID=H1NPZ8_9SPHI
amino acid/peptide transporter; K03305 proton-dependent oligopeptide transporter, POT family
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_146_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

25794..27086
DNA (1293bp) protein (431aa)
phosphoribosylamine--glycine ligase; K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035F2413 rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_146_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

27221..28246
DNA (1026bp) protein (342aa)
Cell shape determining protein, MreB/Mrl family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMS3_NIAKG rbh
MreB/Mrl family cell shape determining protein; K03569 rod shape-determining protein MreB and related proteins rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_146_28
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

28439..29167
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000377BA49
rod shape-determining protein MreC; K03570 rod shape-determining protein MreC
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_146_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

29164..29697
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000363C4FD
rod shape-determining protein MreD
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_146_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

29727..31814
DNA (2088bp) protein (696aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036078A2 rbh
peptidoglycan glycosyltransferase; K05515 penicillin-binding protein 2 rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 45 in total

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