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04302015_24_scaffold_241

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_24_scaffold_241_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1..1614)
DNA (1614bp) protein (538aa)
Alpha-L-arabinofuranosidase domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBK0_NIAKG rbh
alpha-L-arabinofuranosidase rbh
Alpha-L-arabinofuranosidase domain protein {ECO:0000313|EMBL:AEV97110.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
04302015_24_scaffold_241_2
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1686..2354)
DNA (669bp) protein (223aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH39_NIAKG
HAD-superfamily hydrolase {ECO:0000313|EMBL:AHM59369.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
HAD-superfamily hydrolase
04302015_24_scaffold_241_3
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2421..3260)
DNA (840bp) protein (280aa)
Acetylesterase, lipase-GDSL family id=3343146 bin=GWF2_Bacteroidetes_42_66 species=Zobellia galactanivorans genus=Zobellia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
putative O-antigen-like protein
Tax=GWE2_Bacteroidetes_42_39_curated
04302015_24_scaffold_241_4
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3241..5709)
DNA (2469bp) protein (823aa)
alpha-L-fucosidase (EC:3.2.1.51); K15923 alpha-L-fucosidase 2 [EC:3.2.1.51] rbh
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000379BDF2 rbh
Alpha-L-fucosidase {ECO:0000313|EMBL:AKD55646.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
04302015_24_scaffold_241_5

Not on your lists

comp(5803..7206)
DNA (1404bp) protein (468aa)
metallo-beta-lactamase n=1 Tax=Niabella aurantiaca RepID=UPI00035CA844 rbh
Metallo-beta-lactamase {ECO:0000313|EMBL:KHD90198.1}; TaxID=1511133 species="Bacteria; candidate division TM6.;" source="candidate division TM6 bacterium Zodletone_IIa.;"
RNA-metabolising metallo-beta-lactamase; K07576 metallo-beta-lactamase family protein rbh
04302015_24_scaffold_241_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(7238..7720)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003724B5C
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_241_7
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7799..9358)
DNA (1560bp) protein (520aa)
Cysteine protease n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KM47_SOLCM rbh
Peptidase C1 family protein {ECO:0000313|EMBL:GAO44782.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
cysteine protease rbh
04302015_24_scaffold_241_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(9445..10182)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036B4FA1
hypothetical protein; K02066 putative ABC transport system permease protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_241_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(10186..12528)
DNA (2343bp) protein (781aa)
allosteric NADP-dependent malic enzyme; K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
malic enzyme n=1 Tax=Segetibacter koreensis RepID=UPI0003666B1D rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_241_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(12538..13728)
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000380EEC5 rbh
amidohydrolase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_241_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(13733..14176)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036029C9
sporulation domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_241_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(14218..14889)
DNA (672bp) protein (224aa)
deoxyribose-phosphate aldolase; K01619 deoxyribose-phosphate aldolase [EC:4.1.2.4]
deoxyribose-phosphate aldolase n=1 Tax=Niabella aurantiaca RepID=UPI00036C5B10 rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_241_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15006..15680
DNA (675bp) protein (225aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_241_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(15910..19215)
DNA (3306bp) protein (1102aa)
preprotein translocase subunit SecA n=1 Tax=Segetibacter koreensis RepID=UPI00037B0218
protein translocase subunit secA; K03070 preprotein translocase subunit SecA
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_241_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

19462..20064
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5C0K7_9BACT
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_241_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

20241..21122
DNA (882bp) protein (294aa)
ATP synthase F1 subcomplex subunit gamma; K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14]
F0F1 ATP synthase subunit gamma n=1 Tax=Segetibacter koreensis RepID=UPI0003690C5C rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_241_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

21171..22034
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036AFFB0
chromosome segregation and condensation protein ScpB; K06024 segregation and condensation protein B rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_241_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

22071..23282
DNA (1212bp) protein (404aa)
diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20]
Diaminopimelate decarboxylase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDQ8_NIAKG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_241_19
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23307..24092
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003748318 rbh
Phosphonate ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC90713.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
phosphonate-transporting ATPase; K02065 putative ABC transport system ATP-binding protein rbh
04302015_24_scaffold_241_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

24103..24603
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036470A1
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_241_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

24688..25617
DNA (930bp) protein (310aa)
malate dehydrogenase; K00024 malate dehydrogenase [EC:1.1.1.37]
Malate dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP96_NIAKG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_241_22
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

25842..28265
DNA (2424bp) protein (808aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000374CF95 rbh
TonB-dependent receptor rbh
TonB-dependent receptor {ECO:0000313|EMBL:AEI51925.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
04302015_24_scaffold_241_23
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28373..29155)
DNA (783bp) protein (261aa)
glycosyl hydrolase; K15532 unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
Putative uncharacterized protein id=4334610 bin=GWF2_Bacteroidetes_42_66 species=Leeuwenhoekiella blandensis genus=Leeuwenhoekiella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
Tax=CG_Paludi_01
04302015_24_scaffold_241_24
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(29221..30894)
DNA (1674bp) protein (558aa)
glycoside hydrolase family protein; K01206 alpha-L-fucosidase [EC:3.2.1.51] rbh
hypothetical protein n=1 Tax=WS1 bacterium JGI 0000059-K21 RepID=UPI00038153FA rbh
Tax=CG_Arma_01
04302015_24_scaffold_241_25
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31000..32529)
DNA (1530bp) protein (510aa)
Altronate dehydratase {ECO:0000313|EMBL:KHJ38980.1}; EC=4.2.1.7 {ECO:0000313|EMBL:KHJ38980.1};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
altronate dehydratase (EC:4.2.1.7); K01685 altronate hydrolase [EC:4.2.1.7] rbh
Altronate dehydratase n=1 Tax=Pedobacter sp. BAL39 RepID=A6EBW6_9SPHI rbh
Displaying 25 items

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