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04302015_24_scaffold_348

Search features with annotation key words

Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_24_scaffold_348_1
unknown

Not on your lists

comp(2..535)
DNA (534bp) protein (178aa)

This feature has no annotations

04302015_24_scaffold_348_2
unknown

Not on your lists

comp(635..1069)
DNA (435bp) protein (145aa)

This feature has no annotations

04302015_24_scaffold_348_3
unknown

Not on your lists

comp(1066..1647)
DNA (582bp) protein (194aa)

This feature has no annotations

04302015_24_scaffold_348_4
unknown

Not on your lists

1775..2164
DNA (390bp) protein (130aa)

This feature has no annotations

04302015_24_scaffold_348_5
Moraxella bovoculi, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2171..3337
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Eubacterium yurii subsp. margaretiae ATCC 43715 RepID=E0QKS6_9FIRM
Serine/threonine protein kinase {ECO:0000313|EMBL:KDN25224.1}; TaxID=743974 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxella.;" source="Moraxella bovoculi 237.;"
KWG Leptospira repeat protein
04302015_24_scaffold_348_6
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3406..4380)
DNA (975bp) protein (325aa)
HipA domain-containing protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1]
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034C77AB rbh
Phosphatidylinositol kinase {ECO:0000313|EMBL:KJF44167.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
04302015_24_scaffold_348_7
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(4380..4700)
DNA (321bp) protein (107aa)
HipA N-terminal domain-containing protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1]
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003677489
Tax=BJP_IG2103_Bacteroidetes_41_9
04302015_24_scaffold_348_8
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4697..4909)
DNA (213bp) protein (71aa)
Transcriptional regulator {ECO:0000313|EMBL:KJF44169.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
Helix-turn-helix domain protein id=4096430 bin=GWF2_Bacteroidetes_35_48 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
transcriptional regulator
04302015_24_scaffold_348_trna_1
unknown

Not on your lists

comp(5338..5424)
DNA (87bp)
transferRNA
04302015_24_scaffold_348_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5458..6225)
DNA (768bp) protein (256aa)
TatD family hydrolase; K03424 TatD DNase family protein [EC:3.1.21.-] rbh
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003605CF0 rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_348_10
unknown

Not on your lists

comp(6188..6412)
DNA (225bp) protein (75aa)

This feature has no annotations

04302015_24_scaffold_348_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6574..7221)
DNA (648bp) protein (216aa)
Polysaccharide deacetylase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJV6_NIAKG
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:AEW01854.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
04302015_24_scaffold_348_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7246..8187)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJV7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01855.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
04302015_24_scaffold_348_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8257..9801
DNA (1545bp) protein (515aa)
glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] rbh
Glutamate--tRNA ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJV8_NIAKG rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_348_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9849..10256
DNA (408bp) protein (136aa)
Methylmalonyl-CoA mutase domain protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
Methylmalonyl-CoA mutase domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJW0_NIAKG
Methylmalonyl-CoA mutase domain protein {ECO:0000313|EMBL:AEW01858.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
04302015_24_scaffold_348_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10272..11048
DNA (777bp) protein (259aa)
Enoyl-CoA hydratase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJW1_NIAKG
Enoyl-CoA hydratase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_348_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

11113..11679
DNA (567bp) protein (189aa)
fumarate hydratase n=1 Tax=Segetibacter koreensis RepID=UPI00035ECE06
class II fumarate hydratase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_348_17
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11700..12560
DNA (861bp) protein (287aa)
class II fumarate hydratase; K01679 fumarate hydratase, class II [EC:4.2.1.2]
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Fumarate hydratase class II n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDB5_CHIPD
04302015_24_scaffold_348_18
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13102..14502)
DNA (1401bp) protein (467aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037414DF
Uncharacterized protein {ECO:0000313|EMBL:AHF16229.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
04302015_24_scaffold_348_19
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14537..15469)
DNA (933bp) protein (311aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VV80_DYAFD rbh
xylose isomerase domain-containing protein rbh
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ACT94903.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
04302015_24_scaffold_348_20
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15480..16982)
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NUI1_9SPHI rbh
Sulfatase {ECO:0000313|EMBL:AHF16231.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein rbh
04302015_24_scaffold_348_21
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16986..19745)
DNA (2760bp) protein (920aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035EF680 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEE48209.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
04302015_24_scaffold_348_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(19818..21440)
DNA (1623bp) protein (541aa)
Amidohydrolase 3 n=1 Tax=Niabella soli DSM 19437 RepID=H1NV94_9SPHI rbh
amidohydrolase; K07047 rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_348_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(21483..22406)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000374C538 rbh
AraC family transcriptional regulator rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_348_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

22588..24567
DNA (1980bp) protein (660aa)
DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000373A419 rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_348_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

24637..24843
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000373AD3D
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_348_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(24864..28310)
DNA (3447bp) protein (1149aa)
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] rbh
transcription-repair coupling factor n=1 Tax=Segetibacter koreensis RepID=UPI00037008A6 rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_348_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

28532..32308
DNA (3777bp) protein (1259aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y0A6_9SPHI rbh
subtilisin-like serine protease rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_348_28
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32409..35333
DNA (2925bp) protein (975aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC96152.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Putative uncharacterized protein id=2506253 bin=GWF1_Flavobacteria_32_7 species=Polaribacter sp. MED152 genus=Polaribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes rbh
hypothetical protein rbh
04302015_24_scaffold_348_29
unknown

Not on your lists

35337..35879
DNA (543bp) protein (181aa)

This feature has no annotations

Displaying 30 items

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