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04302015_24_scaffold_501

Search features with annotation key words

Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_24_scaffold_501_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3..563
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003795436
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_501_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

602..1537
DNA (936bp) protein (312aa)
lipoyl synthase; K03644 lipoic acid synthetase [EC:2.8.1.8] rbh
lipoyl synthase n=1 Tax=Segetibacter koreensis RepID=UPI00036D7C0C rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_501_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1491..2495
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGR6_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_501_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2497..3072)
DNA (576bp) protein (192aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; K03186 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX [EC:4.1.1.-]
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJP9_NIAKG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_501_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3228..4883)
DNA (1656bp) protein (552aa)
alpha-glucan phosphorylase; K00688 starch phosphorylase [EC:2.4.1.1]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037D21C4
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_501_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(4986..5939)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036C43CA
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_501_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6047..6706
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036DCA39
Iron-dependent repressor {ECO:0000313|EMBL:KIC90664.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
DtxR family iron (metal) dependent repressor; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
04302015_24_scaffold_501_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6708..8594
DNA (1887bp) protein (629aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003785165 rbh
Manganese transport protein mntH; K03322 manganese transport protein rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_501_9
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8677..9909
DNA (1233bp) protein (411aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
isocitrate dehydrogenase; K00031 isocitrate dehydrogenase [EC:1.1.1.42] rbh
Isocitrate dehydrogenase [NADP] n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PM91_CHIPD rbh
04302015_24_scaffold_501_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(9998..11641)
DNA (1644bp) protein (548aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJP5_NIAKG rbh
type I phosphodiesterase/nucleotide pyrophosphatase rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_501_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

11789..13042
DNA (1254bp) protein (418aa)
Glycine C-acetyltransferase; K00639 glycine C-acetyltransferase [EC:2.3.1.29] rbh
Glycine C-acetyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJP6_NIAKG rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_501_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(13252..14136)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000367289D
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_501_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(14184..15086)
DNA (903bp) protein (301aa)
Tyrosine recombinase XerC n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQT0_NIAKG
Tyrosine recombinase xerC; K04763 integrase/recombinase XerD
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_501_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15201..15743
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQT1_NIAKG
hypothetical protein; K06940
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_501_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15931..16287)
DNA (357bp) protein (119aa)
UPF0102 protein Niako_0418 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQT2_NIAKG
hypothetical protein; K07460 putative endonuclease
UPF0102 protein Niako_0418 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
04302015_24_scaffold_501_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16357..17556
DNA (1200bp) protein (400aa)
mannose-6-phosphate isomerase; K01809 mannose-6-phosphate isomerase [EC:5.3.1.8] rbh
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000361ED6F rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_501_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

18015..18278
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AAA076-D13 RepID=UPI00035CB7F1
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_501_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(18331..18804)
DNA (474bp) protein (158aa)
RNase HI; K03469 ribonuclease HI [EC:3.1.26.4]
RNaseH ribonuclease n=1 Tax=Segetibacter koreensis RepID=UPI000379F11E
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_501_19
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18816..19607)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI00036B2B34
Uncharacterized protein {ECO:0000313|EMBL:GAO42976.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
phenazine biosynthesis protein PhzF family
04302015_24_scaffold_501_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(19685..21313)
DNA (1629bp) protein (543aa)
Methylcrotonoyl-CoA carboxylase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQT7_NIAKG
methylcrotonoyl-CoA carboxylase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_501_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

21429..23030
DNA (1602bp) protein (534aa)
Choline dehydrogenase (EC:1.1.99.1); K00108 choline dehydrogenase [EC:1.1.99.1] rbh
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BLC8_9BACT rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_24_scaffold_501_22
unknown

Not on your lists

23099..23266
DNA (168bp) protein (56aa)

This feature has no annotations

Displaying 22 items

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