ggKbase home page

04302015_34_scaffold_3115

Search features with annotation key words

Displaying 12 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_34_scaffold_3115_1
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..93
DNA (93bp) protein (31aa)
Uncharacterized protein in transposable element ISH50 n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K269_PSEPS
transposase
Uncharacterized protein {ECO:0000313|EMBL:CDR92568.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoal
04302015_34_scaffold_3115_2
Pseudomonas chloritidismutans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(351..1574)
DNA (1224bp) protein (408aa)
HipA domain-containing protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1] rbh
Phosphatidylinositol kinase n=1 Tax=Pseudomonas chloritidismutans AW-1 RepID=V4Q380_PSECO rbh
Phosphatidylinositol kinase {ECO:0000313|EMBL:ESQ97139.1}; TaxID=1263865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas c
04302015_34_scaffold_3115_3
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1571..1882)
DNA (312bp) protein (104aa)
Helix-turn-helix domain protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WBS6_ACISJ
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ABM43701.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
04302015_34_scaffold_3115_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2027..2266)
DNA (240bp) protein (80aa)
Transcriptional regulator, XRE family n=3 Tax=Proteobacteria RepID=A1WBS7_ACISJ
XRE family transcriptional regulator
XRE family transcriptional regulator {ECO:0000313|EMBL:EQL43558.1}; TaxID=1350465 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseu
04302015_34_scaffold_3115_5
Pseudomonas balearica, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2411..3067
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Pseudomonas aeruginosa RepID=UPI0003AC60B8 rbh
Membrane protein {ECO:0000313|EMBL:AJE14423.1}; TaxID=1123016 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas balearica DS
hypothetical protein rbh
04302015_34_scaffold_3115_6
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3085..3729
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00037916CC rbh
Uncharacterized protein {ECO:0000313|EMBL:KIN90918.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
hypothetical protein rbh
04302015_34_scaffold_3115_7
Pseudomonas chloritidismutans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3726..3980
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Pseudomonas chloritidismutans AW-1 RepID=V4Q5X0_PSECO
Uncharacterized protein {ECO:0000313|EMBL:ESQ97132.1}; TaxID=1263865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlor
hypothetical protein
04302015_34_scaffold_3115_8

Not on your lists

comp(4270..5319)
DNA (1050bp) protein (350aa)
Transposase n=2 Tax=Pseudomonas RepID=F8H063_PSEUT rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN60815.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
tnpA; transposase rbh
04302015_34_scaffold_3115_9

Not on your lists

comp(5316..6068)
DNA (753bp) protein (251aa)
Uncharacterized protein n=6 Tax=Pseudomonas RepID=F8H062_PSEUT rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN60816.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein rbh
04302015_34_scaffold_3115_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6163..6798)
DNA (636bp) protein (212aa)
TetR family transcriptional regulator n=1 Tax=Pseudomonas mendocina DLHK RepID=J7TKU3_PSEME rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP05483.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
TetR family transcriptional regulator
04302015_34_scaffold_3115_11
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6879..8060)
DNA (1182bp) protein (394aa)
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase n=1 Tax=Pseudomonas mendocina DLHK RepID=J7U0S5_PSEME rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ERV82432.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
04302015_34_scaffold_3115_12
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8175..8870)
DNA (696bp) protein (232aa)
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:KJU80005.1}; EC=4.1.3.4 {ECO:0000313|EMBL:KJU80005.1};; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonad
hydroxymethylglutaryl-CoA lyase (EC:4.1.3.4); K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SVV5_PSEME
Displaying 12 items

View Taxonomy