ggKbase home page

04302015_34_scaffold_2267

Search features with annotation key words

Displaying 15 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_34_scaffold_2267_1
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..85)
DNA (84bp) protein (28aa)
TetR family transcriptional regulator {ECO:0000313|EMBL:KFJ89843.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseu
TetR family transcriptional regulator
04302015_34_scaffold_2267_2
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

175..783
DNA (609bp) protein (203aa)
short-chain dehydrogenase n=1 Tax=Pseudomonas alcaliphila RepID=UPI00036CC72A rbh
Glucose 1-dehydrogenase {ECO:0000313|EMBL:KJU78944.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoal
short-chain dehydrogenase/reductase SDR
04302015_34_scaffold_2267_3
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

876..1469
DNA (594bp) protein (198aa)
DSBA oxidoreductase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7JKU4_PSEPS rbh
DSBA oxidoreductase {ECO:0000313|EMBL:CDR91489.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcali
DSBA oxidoreductase rbh
04302015_34_scaffold_2267_4
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1516..1731
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DQE1_PSEMN
Uncharacterized protein {ECO:0000313|EMBL:EZH82817.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseu
hypothetical protein; K09954 hypothetical protein
04302015_34_scaffold_2267_5
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1788..2603)
DNA (816bp) protein (272aa)
Ion transport protein n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K3D0_PSEPS rbh
Ion transport protein {ECO:0000313|EMBL:CDM41027.1}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudo
ion transport protein; K08714 voltage-gated sodium channel rbh
04302015_34_scaffold_2267_6
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2677..3225)
DNA (549bp) protein (183aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000
adenine phosphoribosyltransferase; K00759 adenine phosphoribosyltransferase [EC:2.4.2.7] rbh
Adenine phosphoribosyltransferase n=1 Tax=Pseudomonas mendocina DLHK RepID=J7TMB7_PSEME rbh
04302015_34_scaffold_2267_7
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3269..4003)
DNA (735bp) protein (245aa)
CRP/FNR family transcriptional regulator n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K8T2_PSEPS rbh
CRP/FNR family transcriptional regulator {ECO:0000313|EMBL:CDM41025.1}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomona
CRP/FNR family transcriptional regulator; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein rbh
04302015_34_scaffold_2267_8
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4154..4597
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7JKI5_PSEPS
Uncharacterized protein {ECO:0000313|EMBL:CDR91652.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoal
hypothetical protein
04302015_34_scaffold_2267_9
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4632..5630)
DNA (999bp) protein (333aa)
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Ps
coproporphyrinogen III oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22]
Coproporphyrinogen-III oxidase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IZN9_PSEPS rbh
04302015_34_scaffold_2267_10
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5630..5989)
DNA (360bp) protein (120aa)
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudo
coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22]
coproporphyrinogen III oxidase n=1 Tax=Pseudomonas alcaliphila RepID=UPI000317137A
04302015_34_scaffold_2267_11
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6156..6839)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K3D4_PSEPS rbh
Uncharacterized protein {ECO:0000313|EMBL:CDR91650.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoal
hypothetical protein; K09792 hypothetical protein rbh
04302015_34_scaffold_2267_12
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6832..7038)
DNA (207bp) protein (69aa)
Cytochrome oxidase maturation protein,cbb3-type,CcoS n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IEA8_PSEPS
Cytochrome oxidase maturation protein, cbb3-type, CcoS {ECO:0000313|EMBL:CDM41021.1}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomon
cytochrome oxidase maturation protein, cbb3-type
04302015_34_scaffold_2267_13
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7085..9481)
DNA (2397bp) protein (799aa)
Type cbb3 cytochrome oxidase biogenesis protein CcoI {ECO:0000313|EMBL:CDR91648.1}; EC=3.6.3.4 {ECO:0000313|EMBL:CDR91648.1};; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudom
heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] rbh
Type cbb3 cytochrome oxidase biogenesis protein CcoI n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K8T4_PSEPS rbh
04302015_34_scaffold_2267_14
Pseudomonas sp. EGD-AK9, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9490..10008)
DNA (519bp) protein (173aa)
Membrane protein n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U2BDH3_9PSED rbh
Membrane protein {ECO:0000313|EMBL:ERI53256.1}; TaxID=1386078 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. EGD-AK9.
hypothetical protein; K09926 hypothetical protein rbh
04302015_34_scaffold_2267_15
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10022..10825)
DNA (804bp) protein (268aa)
(Fe-S)-binding protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U6Z9_PSEME
(Fe-S)-binding protein {ECO:0000313|EMBL:ERH50807.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendoc
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Displaying 15 items

View Taxonomy