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04302015_34_scaffold_222

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_34_scaffold_222_1
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..942
DNA (942bp) protein (314aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomona
tRNA-dihydrouridine synthase A; K05539 tRNA-dihydrouridine synthase A [EC:1.-.-.-] rbh
tRNA-dihydrouridine synthase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K3U1_PSEPS rbh
04302015_34_scaffold_222_2
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1227..2153
DNA (927bp) protein (309aa)
transaldolase B; K00616 transaldolase [EC:2.2.1.2] rbh
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|RuleBase:RU004155}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|RuleBase:RU004155};; TaxID=1001585 species="Bacteria; Proteobac
Transaldolase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4E057_PSEMN rbh
04302015_34_scaffold_222_3
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2284..2778)
DNA (495bp) protein (165aa)
Anti-sigma factor antagonist n=2 Tax=Pseudomonas aeruginosa group RepID=I7K943_PSEPS rbh
Anti-sigma factor antagonist {ECO:0000313|EMBL:CDM40826.1}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans
anti-sigma-factor antagonist rbh
04302015_34_scaffold_222_4
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2775..3959)
DNA (1185bp) protein (395aa)
Response regulator receiver protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4E059_PSEMN rbh
response regulator receiver protein rbh
Response regulator receiver protein {ECO:0000313|EMBL:AEB58999.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseud
04302015_34_scaffold_222_5
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4174..4473
DNA (300bp) protein (100aa)
Pilus assembly protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SLX4_PSEME
Pilus assembly protein {ECO:0000313|EMBL:ERH47231.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendoc
type IV pilus assembly PilZ
04302015_34_scaffold_222_6
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4592..5923
DNA (1332bp) protein (444aa)
Transposase insG for insertion sequence element IS4 n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K582_PSEPS rbh
Transposase InsG for insertion sequence element IS4 {ECO:0000313|EMBL:CDM39058.1}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas;
transposase and inactivated derivative
04302015_34_scaffold_222_7
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5967..6671)
DNA (705bp) protein (235aa)
VacJ family lipoprotein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SLQ0_PSEME rbh
VacJ family lipoprotein {ECO:0000313|EMBL:ERH47151.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendo
VacJ family lipoprotein; K04754 lipoprotein rbh
04302015_34_scaffold_222_8
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6775..7185
DNA (411bp) protein (137aa)
thioesterase superfamily protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
thioesterase n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002EDE2A6
Thioesterase {ECO:0000313|EMBL:KJU78456.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes g
04302015_34_scaffold_222_9
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7325..8041
DNA (717bp) protein (239aa)
Phosphatase/phosphohexomutase-like protein {ECO:0000313|EMBL:CDR91703.1}; EC=3.11.1.1 {ECO:0000313|EMBL:CDR91703.1};; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
Phosphatase/phosphohexomutase-like protein n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7JKG8_PSEPS rbh
phosphatase/phosphohexomutase-like protein rbh
04302015_34_scaffold_222_10
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8161..8427
DNA (267bp) protein (89aa)
Chromosome segregation ATPase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SMQ7_PSEME
hypothetical protein
Chromosome partitioning protein ParA {ECO:0000313|EMBL:EZH76975.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas ol
04302015_34_scaffold_222_11
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8625..9455)
DNA (831bp) protein (277aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00037296}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00001352};; 7-cyan
7-cyano-7-deazaguanine reductase; K06879 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] rbh
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1S5U1_PSEME rbh
04302015_34_scaffold_222_12
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9625..12693)
DNA (3069bp) protein (1023aa)
acriflavin resistance protein n=1 Tax=Pseudomonas alcaliphila RepID=UPI00031C164A rbh
Multidrug transporter AcrB {ECO:0000313|EMBL:KFJ91950.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp.
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family rbh
04302015_34_scaffold_222_13
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12690..13712)
DNA (1023bp) protein (341aa)
RND transporter n=1 Tax=Pseudomonas mendocina RepID=UPI000371CE1A rbh
RND family efflux transporter MFP subunit rbh
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:AEB59007.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source=
04302015_34_scaffold_222_14
Pseudomonas sp. EGD-AK9, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13959..14753)
DNA (795bp) protein (265aa)
Membrane protein n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U2A482_9PSED rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1386078 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
ABC transporter; K09686 antibiotic transport system permease protein rbh
04302015_34_scaffold_222_15
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14750..15682)
DNA (933bp) protein (311aa)
ABC transporter related protein n=2 Tax=Pseudomonas mendocina RepID=A4XTL5_PSEMY rbh
ABC transporter-like protein; K09687 antibiotic transport system ATP-binding protein rbh
ABC transporter related protein {ECO:0000313|EMBL:ABP84681.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
04302015_34_scaffold_222_16
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15837..16499)
DNA (663bp) protein (221aa)
cysteine protease n=1 Tax=Pseudomonas alcaliphila RepID=UPI000315F912 rbh
Cysteine protease {ECO:0000313|EMBL:EZH76981.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalca
transglutaminase-like enzymes putative cysteine protease-like protein rbh
04302015_34_scaffold_222_17
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16642..19089
DNA (2448bp) protein (816aa)
acyl-CoA dehydrogenase; K06445 acyl-CoA dehydrogenase [EC:1.3.99.-] rbh
acyl-CoA dehydrogenase n=1 Tax=Pseudomonas alcaliphila RepID=UPI00030328F6 rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ERH47161.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendoc
04302015_34_scaffold_222_18
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19284..19691
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Pseudomonas mendocina RepID=J7UQU8_PSEME
Dehydrogenase {ECO:0000313|EMBL:KJU78442.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes
hypothetical protein
04302015_34_scaffold_222_19
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19794..20342
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7JKG5_PSEPS rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM41085.1}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseu
hypothetical protein
04302015_34_scaffold_222_20
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20339..20623
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K8P5_PSEPS
Uncharacterized protein {ECO:0000313|EMBL:CDR91714.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoal
hypothetical protein
04302015_34_scaffold_222_21
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20824..21687
DNA (864bp) protein (288aa)
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:CDR91715.1}; EC=3.1.2.6 {ECO:0000313|EMBL:CDR91715.1};; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseud
Metallo-beta-lactamase family protein n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IE95_PSEPS rbh
metallo-beta-lactamase family protein
04302015_34_scaffold_222_22
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21704..23473
DNA (1770bp) protein (590aa)
Sulfate transporter 3.1AST12AtST1 n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K390_PSEPS rbh
Sulfate transporter 3,1 {ECO:0000313|EMBL:CDR91716.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoal
high affinity sulfate transporter 1 rbh
04302015_34_scaffold_222_23
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23457..23837
DNA (381bp) protein (127aa)
Rhodanese domain-containing protein n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IZK9_PSEPS
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoal
Rhodanese-domain protein
04302015_34_scaffold_222_24
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23910..24365)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL17 RepID=U8HEB5_PSEAI
Integrase {ECO:0000313|EMBL:BAQ39100.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
phage-related integrase
04302015_34_scaffold_222_25
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24530..24622)
DNA (93bp) protein (31aa)
Uncharacterized protein in transposable element ISH50 n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K269_PSEPS
transposase
Uncharacterized protein {ECO:0000313|EMBL:CDR92568.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoal
Displaying 25 items

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