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04302015_34_scaffold_466

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_34_scaffold_466_1
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..243)
DNA (243bp) protein (81aa)
DNA repair protein RadC n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DQY1_PSEMN
DNA repair protein RadC; K03630 DNA repair protein RadC
DNA repair protein RadC {ECO:0000313|EMBL:AEB60737.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendo
04302015_34_scaffold_466_2
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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318..1526
DNA (1209bp) protein (403aa)
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase (EC:4.1.1.36 6.3.2.5); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4 rbh
Phosphopantothenate synthase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1TSG3_PSEME rbh
Phosphopantothenate synthase {ECO:0000313|EMBL:ERH47018.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
04302015_34_scaffold_466_3
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1529..1984
DNA (456bp) protein (152aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule
deoxyuridine 5'-triphosphate nucleotidohydrolase; K01520 dUTP pyrophosphatase [EC:3.6.1.23] rbh
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SMC3_PSEME rbh
04302015_34_scaffold_466_4
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2022..4592
DNA (2571bp) protein (857aa)
phosphomannomutase; K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] rbh
Phosphomannomutase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DQY4_PSEMN rbh
Phosphomannomutase {ECO:0000313|EMBL:EZH83891.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalc
04302015_34_scaffold_466_5
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4617..5522
DNA (906bp) protein (302aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotra
acetylglutamate kinase; K00930 acetylglutamate kinase [EC:2.7.2.8] rbh
Acetylglutamate kinase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K7W1_PSEPS rbh
04302015_34_scaffold_466_6
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5771..6217
DNA (447bp) protein (149aa)
thioesterase superfamily protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
MFS transporter n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SLD0_PSEME
MFS transporter {ECO:0000313|EMBL:KJU79573.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligene
04302015_34_scaffold_466_7
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6229..6831)
DNA (603bp) protein (201aa)
Keratin type II cytoskeletal 75;cytokeratin-75;CK-75;Keratin-75;K75;Type II keratin-18;Type II keratin-K6hf;Keratin-6 hair follicle;hK6hf n=1 Tax=Pseudomonas alcaliphila RepID=UPI0003182301 rbh
Keratin {ECO:0000313|EMBL:KJU79574.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.
hypothetical protein rbh
04302015_34_scaffold_466_8
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6852..7493)
DNA (642bp) protein (214aa)
orotate phosphoribosyltransferase; K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] rbh
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=
Orotate phosphoribosyltransferase n=2 Tax=Pseudomonas mendocina RepID=F4DQY8_PSEMN rbh
04302015_34_scaffold_466_9
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7574..8353
DNA (780bp) protein (260aa)
exodeoxyribonuclease III Xth; K01142 exodeoxyribonuclease III [EC:3.1.11.2] rbh
Exodeoxyribonuclease III Xth n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4Y0L5_PSEMY rbh
Exodeoxyribonuclease III Xth {ECO:0000313|EMBL:ABP87131.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas m
04302015_34_scaffold_466_10
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8406..8777)
DNA (372bp) protein (124aa)
Orotate phosphoribosyltransferase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1S5G6_PSEME
Orotate phosphoribosyltransferase {ECO:0000313|EMBL:KJU79578.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovoran
hypothetical protein; K09940 hypothetical protein
04302015_34_scaffold_466_11
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8804..9523)
DNA (720bp) protein (240aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS
rph; ribonuclease PH (EC:2.7.7.56); K00989 ribonuclease PH [EC:2.7.7.56] rbh
ribonuclease PH n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002DD48A4 rbh
04302015_34_scaffold_466_12
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9709..10572
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002DA8B8A rbh
Uncharacterized protein {ECO:0000313|EMBL:ERH47027.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendo
hypothetical protein rbh
04302015_34_scaffold_466_13
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10626..11246
DNA (621bp) protein (207aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_0
gmk; guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8] rbh
Guanylate kinase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7KC95_PSEPS rbh
04302015_34_scaffold_466_14
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11396..11659
DNA (264bp) protein (88aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6); K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
DNA-directed RNA polymerase subunit omega n=2 Tax=Pseudomonas aeruginosa group RepID=I7JPH3_PSEPS
04302015_34_scaffold_466_15
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11723..12385
DNA (663bp) protein (221aa)
Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase {ECO:0000313|EMBL:CDM42758.1}; EC=3.1.7.2 {ECO:0000313|EMBL:CDM42758.1};; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria;
(P)ppGpp synthetase I n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DQZ6_PSEMN
(p)ppGpp synthetase I
Displaying 15 items

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