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04302015_34_scaffold_782

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_34_scaffold_782_1
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(176..937)
DNA (762bp) protein (254aa)
ABC transporter-like protein; K09972 general L-amino acid transport system ATP-binding protein [EC:3.6.3.-] rbh
Putative ATP-binding component of a transport system n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7KAC9_PSEPS rbh
Putative ATP-binding component of a transport system {ECO:0000313|EMBL:CDM39611.1}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
04302015_34_scaffold_782_2
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1033..2130)
DNA (1098bp) protein (366aa)
amino acid ABC transporter permease n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002E2E7C2 rbh
Amino acid ABC transporter permease {ECO:0000313|EMBL:EZH84063.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas ole
polar amino acid ABC transporter inner membrane subunit; K09971 general L-amino acid transport system permease protein rbh
04302015_34_scaffold_782_3
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2140..3324)
DNA (1185bp) protein (395aa)
Amino acid ABC transporter membrane protein 1, PAAT family n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XY91_PSEMY rbh
Amino acid ABC transporter permease {ECO:0000313|EMBL:EZH84062.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas ole
polar amino acid ABC transporter inner membrane subunit; K09970 general L-amino acid transport system permease protein rbh
04302015_34_scaffold_782_4
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3539..4567)
DNA (1029bp) protein (343aa)
Extracellular solute-binding protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DUX9_PSEMN rbh
extracellular solute-binding protein; K09969 general L-amino acid transport system substrate-binding protein rbh
Extracellular solute-binding protein {ECO:0000313|EMBL:AEB59857.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseu
04302015_34_scaffold_782_5
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5046..5705
DNA (660bp) protein (220aa)
Carboxylesterase {ECO:0000313|EMBL:CDM39607.1}; EC=3.1.1.1 {ECO:0000313|EMBL:CDM39607.1};; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseu
Carboxylesterase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IEU4_PSEPS rbh
carboxylesterase; K06999 phospholipase/carboxylesterase rbh
04302015_34_scaffold_782_6
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6311..7249
DNA (939bp) protein (313aa)
Cyclic nucleotide-binding protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U5K9_PSEME rbh
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:EZH84058.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleov
cyclic nucleotide-binding protein rbh
04302015_34_scaffold_782_7
Pseudomonas sp. EGD-AK9, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7521..8966
DNA (1446bp) protein (482aa)
ATP-dependent RNA helicase RhlB {ECO:0000256|HAMAP-Rule:MF_00661, ECO:0000256|SAAS:SAAS00011806}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00661, ECO:0000256|SAAS:SAAS00011808};; TaxID=1386078 species="
ATP-dependent RNA helicase RhlB; K03732 ATP-dependent RNA helicase RhlB [EC:3.6.4.13] rbh
RNA helicase n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002FFE0A0 rbh
04302015_34_scaffold_782_8
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9038..9910)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Pseudomonas mendocina RepID=UPI0003744A31 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB59864.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendo
04302015_34_scaffold_782_9

Not on your lists

comp(10118..11287)
DNA (1170bp) protein (390aa)
Transposase, IS4 n=1 Tax=uncultured bacterium RepID=C5JAJ7_9BACT
Transposase, IS4 {ECO:0000313|EMBL:CAX83790.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transposase IS4
04302015_34_scaffold_782_10
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11571..11876)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SZC3_PSEME
Uncharacterized protein {ECO:0000313|EMBL:ERH51606.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendo
hypothetical protein
04302015_34_scaffold_782_11
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11937..12152)
DNA (216bp) protein (72aa)
Membrane protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U992_PSEME
Membrane protein {ECO:0000313|EMBL:ERH51607.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina EG
integral membrane protein TerC; K05794 tellurite resistance protein TerC
04302015_34_scaffold_782_12
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12380..14743)
DNA (2364bp) protein (788aa)
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Ps
DNA polymerase II; K02336 DNA polymerase II [EC:2.7.7.7] rbh
DNA polymerase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IEU6_PSEPS rbh
04302015_34_scaffold_782_13
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14953..15381
DNA (429bp) protein (143aa)
Globin n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DUZ2_PSEMN
globin; K06886 hemoglobin
Globin {ECO:0000313|EMBL:AEB59870.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-0
04302015_34_scaffold_782_14
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15383..15565
DNA (183bp) protein (61aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pse
FKBP-type peptidyl-prolyl cis-trans isomerase; K01802 peptidylprolyl isomerase [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SII4_PSEME
Displaying 14 items

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