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04302015_34_scaffold_801

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_34_scaffold_801_1
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104..1015)
DNA (912bp) protein (304aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; K02535 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] rbh
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS0004138
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase n=2 Tax=Pseudomonas mendocina RepID=F4DS26_PSEMN rbh
04302015_34_scaffold_801_2
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1127..2320)
DNA (1194bp) protein (398aa)
Cell division protein FtsZ n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IXE8_PSEPS rbh
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudo
cell division protein FtsZ; K03531 cell division protein FtsZ rbh
04302015_34_scaffold_801_3
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2366..3613)
DNA (1248bp) protein (416aa)
Cell division protein ftsA n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7JI50_PSEPS rbh
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans
cell division protein FtsA; K03590 cell division protein FtsA rbh
04302015_34_scaffold_801_4
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3629..4495)
DNA (867bp) protein (289aa)
Cell division protein FtsQ n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XQS7_PSEMY rbh
polypeptide-transport-associated domain-containing protein; K03589 cell division protein FtsQ rbh
Cell division protein FtsQ {ECO:0000256|HAMAP-Rule:MF_00911, ECO:0000256|SAAS:SAAS00006985}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pse
04302015_34_scaffold_801_5
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4499..5305)
DNA (807bp) protein (269aa)
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] rbh
D-alanine--D-alanine ligase {ECO:0000255|HAMAP-Rule:MF_00047}; EC=6.3.2.4 {ECO:0000255|HAMAP-Rule:MF_00047};; D-Ala-D-Ala ligase {ECO:0000255|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000
D-alanine--D-alanine ligase n=2 Tax=Pseudomonas mendocina RepID=DDL_PSEMY rbh
04302015_34_scaffold_801_6
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5277..6308)
DNA (1032bp) protein (344aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuram
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8); K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
UDP-N-acetylmuramate--alanine ligase n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002DC5866 rbh
04302015_34_scaffold_801_7
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6308..6577)
DNA (270bp) protein (90aa)
UDP-N-acetylmuramate--L-alanine ligase; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuram
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K0R4_PSEPS
04302015_34_scaffold_801_8
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6570..7640)
DNA (1071bp) protein (357aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:
murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acety rbh
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IXE7_PSEPS rbh
04302015_34_scaffold_801_9
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7630..8850)
DNA (1221bp) protein (407aa)
Lipid II flippase FtsW n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7JI48_PSEPS rbh
Putative lipid II flippase FtsW {ECO:0000256|HAMAP-Rule:MF_00913}; Cell division protein FtsW {ECO:0000256|HAMAP-Rule:MF_00913}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Ps
cell division protein FtsW; K03588 cell division protein FtsW rbh
04302015_34_scaffold_801_10
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8844..10193)
DNA (1350bp) protein (450aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutam
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] rbh
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K5K8_PSEPS rbh
04302015_34_scaffold_801_11
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10200..11282)
DNA (1083bp) protein (361aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:
phospho-N-acetylmuramoyl-pentapeptide-transferase; K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] rbh
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IDD6_PSEPS rbh
04302015_34_scaffold_801_12
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11283..12653)
DNA (1371bp) protein (457aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacter
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] rbh
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K0R0_PSEPS rbh
04302015_34_scaffold_801_13
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12646..14109)
DNA (1464bp) protein (488aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] rbh
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IXE5_PSEPS rbh
04302015_34_scaffold_801_14
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14109..15476)
DNA (1368bp) protein (456aa)
Peptidoglycan synthetase FtsI {ECO:0000313|EMBL:CDM42020.1}; EC=2.4.1.129 {ECO:0000313|EMBL:CDM42020.1};; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudom
peptidoglycan synthetase FtsI; K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129]
Peptidoglycan synthetase FtsI n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7JI46_PSEPS rbh
04302015_34_scaffold_801_15
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15762..16055)
DNA (294bp) protein (98aa)
Cell division protein FtsL n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K5K3_PSEPS
Cell division protein FtsL {ECO:0000256|HAMAP-Rule:MF_00910}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovora
cell division protein FtsL; K03586 cell division protein FtsL
04302015_34_scaffold_801_16
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16052..16438)
DNA (387bp) protein (129aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_0100
mraW; S-adenosyl-methyltransferase MraW; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IDD5_PSEPS
Displaying 16 items

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