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04302015_34_scaffold_1038

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_34_scaffold_1038_1
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1031)
DNA (1029bp) protein (343aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=RPOB_HYPNA
04302015_34_scaffold_1038_2
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1185..1565)
DNA (381bp) protein (127aa)
50S ribosomal protein L7/L12 n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=RL7_HYPNA
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12
04302015_34_scaffold_1038_3
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1624..2139)
DNA (516bp) protein (172aa)
50S ribosomal protein L10 n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=RL10_HYPNA rbh
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyph
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 rbh
04302015_34_scaffold_1038_4
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2533..3228)
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=RL1_HYPNA rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas pol
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 rbh
04302015_34_scaffold_1038_5
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3234..3680)
DNA (447bp) protein (149aa)
50S ribosomal protein L11 n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=RL11_HYPNA
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas po
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11
04302015_34_scaffold_1038_6
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3880..4716)
DNA (837bp) protein (279aa)
M48 family peptidase (EC:3.4.24.-); K01417 [EC:3.4.24.-] rbh
Peptidase, M48 family n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BY99_HYPNA rbh
M48 family peptidase {ECO:0000313|EMBL:KDA00320.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas polymorpha
04302015_34_scaffold_1038_7
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4829..6172)
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI00035DE66F
Uncharacterized protein {ECO:0000313|EMBL:KDA00319.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas polymorp
hypothetical protein
04302015_34_scaffold_1038_8
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6169..7593)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BY96_HYPNA rbh
Uncharacterized protein {ECO:0000313|EMBL:KDA00318.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas polymorp
hypothetical protein rbh
04302015_34_scaffold_1038_9
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7701..8129
DNA (429bp) protein (143aa)
RNA methyltransferase, TrmH family n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BY95_HYPNA
RNA methyltransferase {ECO:0000313|EMBL:KDA00317.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas polymorpha
RNA methyltransferase; K03437 RNA methyltransferase, TrmH family
Displaying 9 items

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