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04302015_34_scaffold_56

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_34_scaffold_56_1
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..333
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BXP6_HYPNA
Uncharacterized protein {ECO:0000313|EMBL:KCZ97066.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas polymorp
hypothetical protein
04302015_34_scaffold_56_2
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(420..3881)
DNA (3462bp) protein (1154aa)
Indolepyruvate ferredoxin oxidoreductase {ECO:0000313|EMBL:KCZ97065.1}; EC=1.2.7.8 {ECO:0000313|EMBL:KCZ97065.1};; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales
indolepyruvate ferredoxin oxidoreductase (EC:1.2.7.8); K04090 indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] rbh
Pyruvate ferredoxin/flavodoxin oxidoreductase family protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BXP7_HYPNA rbh
04302015_34_scaffold_56_3
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4008..4505
DNA (498bp) protein (166aa)
Transcriptional regulator, AsnC family n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BXP8_HYPNA rbh
AsnC family transcriptional regulator {ECO:0000313|EMBL:KCZ97064.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hypho
AsnC family transcriptional regulator rbh
04302015_34_scaffold_56_4
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4573..5637
DNA (1065bp) protein (355aa)
Beta-lactamase n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BXP9_HYPNA rbh
Beta-lactamase {ECO:0000313|EMBL:KCZ97063.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas polymorpha PS728.
beta-lactamase rbh
04302015_34_scaffold_56_5
Hyphomonas neptunium, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5634..6716)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BXQ0_HYPNA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABI75748.1}; TaxID=228405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas neptunium
04302015_34_scaffold_56_6
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6735..7358)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BXQ1_HYPNA rbh
Uncharacterized protein {ECO:0000313|EMBL:KCZ97061.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas polymorp
hypothetical protein rbh
04302015_34_scaffold_56_7
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7369..8550)
DNA (1182bp) protein (394aa)
acetyl-CoA acetyltransferase/thiolase family protein; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] rbh
Acetyl-CoA acetyltransferase/thiolase family protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BXQ2_HYPNA rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KCZ97059.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas pol
04302015_34_scaffold_56_8
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8654..9247)
DNA (594bp) protein (198aa)
glutathione peroxidase (EC:1.11.1.-); K00432 glutathione peroxidase [EC:1.11.1.9] rbh
Glutathione peroxidase n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BXQ3_HYPNA rbh
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas polymor
04302015_34_scaffold_56_9
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9352..9681)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BXQ4_HYPNA
Uncharacterized protein {ECO:0000313|EMBL:KCZ97057.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas polymorp
hypothetical protein
04302015_34_scaffold_56_10
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9805..12045)
DNA (2241bp) protein (747aa)
M13 family peptidase (EC:3.4.24.-); K07386 putative endopeptidase [EC:3.4.24.-] rbh
Peptidase, M13 family n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BXQ5_HYPNA rbh
M13 family peptidase {ECO:0000313|EMBL:KCZ97056.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas polymorpha
04302015_34_scaffold_56_11
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12135..15359)
DNA (3225bp) protein (1075aa)
AcrB/AcrD/AcrF family protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BXQ6_HYPNA rbh
AcrB/AcrD/AcrF family protein {ECO:0000313|EMBL:KCZ97055.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas po
AcrB/AcrD/AcrF family protein rbh
04302015_34_scaffold_56_12
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15356..16618)
DNA (1263bp) protein (421aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BXQ7_HYPNA rbh
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:KCZ97054.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="H
RND family efflux transporter MFP subunit rbh
04302015_34_scaffold_56_13
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16624..18093)
DNA (1470bp) protein (490aa)
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BXQ8_HYPNA rbh
RND efflux system outer membrane lipoprotein {ECO:0000313|EMBL:KCZ97053.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source
RND efflux system outer membrane lipoprotein rbh
04302015_34_scaffold_56_14
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18307..19692
DNA (1386bp) protein (462aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae;
sensor histidine kinase (EC:2.7.3.-); K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] rbh
Sensor histidine kinase n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BXQ9_HYPNA rbh
04302015_34_scaffold_56_15
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19782..20330)
DNA (549bp) protein (183aa)
GcrA cell cycle regulator n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BXR0_HYPNA rbh
GcrA cell cycle regulator {ECO:0000313|EMBL:KCZ97051.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas polymo
gcrA; GcrA cell cycle regulator; K13583 GcrA cell cycle regulator rbh
04302015_34_scaffold_56_16
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20579..21406
DNA (828bp) protein (276aa)
ABC transporter, permease protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BXR1_HYPNA rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas pol
ABC transporter permease; K09686 antibiotic transport system permease protein rbh
04302015_34_scaffold_56_17
Hyphomonas hirschiana, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21534..22145
DNA (612bp) protein (204aa)
Putative lipoprotein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BXR2_HYPNA rbh
putative lipoprotein rbh
Putative lipoprotein {ECO:0000313|EMBL:KCZ93579.1}; TaxID=1280951 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas hirschiana
04302015_34_scaffold_56_18
Hyphomonas hirschiana, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22170..22604)
DNA (435bp) protein (145aa)
Thioesterase family protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BXR3_HYPNA
thioesterase family protein
Thioesterase family protein {ECO:0000313|EMBL:KCZ93580.1}; TaxID=1280951 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas hirs
04302015_34_scaffold_56_19
Hyphomonas hirschiana, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22689..23975)
DNA (1287bp) protein (429aa)
Major facilitator family transporter n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BXR4_HYPNA rbh
major facilitator family transporter rbh
Major facilitator family transporter {ECO:0000313|EMBL:KCZ93581.1}; TaxID=1280951 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphom
04302015_34_scaffold_56_20
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23972..24847)
DNA (876bp) protein (292aa)
Hydrolase, alpha/beta fold family n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BXR5_HYPNA rbh
Alpha/beta fold family hydrolase {ECO:0000313|EMBL:KCZ97048.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas
alpha/beta fold family hydrolase rbh
04302015_34_scaffold_56_21
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25009..25716
DNA (708bp) protein (236aa)
Transcriptional regulator, TetR family n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BXR6_HYPNA rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:KCZ97047.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hypho
TetR family transcriptional regulator rbh
04302015_34_scaffold_56_22
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25863..28199)
DNA (2337bp) protein (779aa)
TonB-dependent receptor n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BXR7_HYPNA rbh
TonB-dependent receptor {ECO:0000313|EMBL:KCZ97046.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas polymorp
TonB-dependent receptor rbh
04302015_34_scaffold_56_23
Hyphomonas hirschiana, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28561..29481)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BXR8_HYPNA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:KCZ93585.1}; TaxID=1280951 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas hirschia
Displaying 23 items

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