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04302015_34_scaffold_383

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_34_scaffold_383_1
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..436
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4X079_RHOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP73043.1}; TaxID=349102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaer
04302015_34_scaffold_383_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(870..1289)
DNA (420bp) protein (140aa)
Transposase, Mutator family n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QHT6_BREDI
Transposase, Mutator family {ECO:0000313|EMBL:EKY27579.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimon
transposase for insertion sequence element IS1081
04302015_34_scaffold_383_3
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1286..1705)
DNA (420bp) protein (140aa)
Putative nucleoside diphosphate kinase regulator n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CH35_9RHOB
Nucleoside diphosphate kinase {ECO:0000313|EMBL:KEJ98246.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitoba
greA2; GreA/GreB family elongation factor; K06140 regulator of nucleoside diphosphate kinase
04302015_34_scaffold_383_4
Oceanibulbus indolifex, Oceanibulbus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1842..2333)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9EFE9_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EDQ03202.1}; TaxID=391624 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanibulbus.;" source="Oceanibulbus indo
04302015_34_scaffold_383_5
Litoreibacter arenae, Litoreibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2509..2883)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9RJF7_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EPX78255.1}; TaxID=1123360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Litoreibacter.;" source="Litoreibacter a
04302015_34_scaffold_383_6
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3287..4777)
DNA (1491bp) protein (497aa)
glutamate dehydrogenase; K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4] rbh
Glutamate dehydrogenase n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IZX1_POLGS rbh
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160
04302015_34_scaffold_383_7
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5159..5677
DNA (519bp) protein (173aa)
UPI0003D19F69 related cluster n=1 Tax=unknown RepID=UPI0003D19F69
Contig10, whole genome shotgun sequence {ECO:0000313|EMBL:ETA50160.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacterace
hypothetical protein
04302015_34_scaffold_383_8
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5729..6145
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4X0F8_RHOS5
nucleoside diphosphate kinase regulator; K06140 regulator of nucleoside diphosphate kinase
Uncharacterized protein {ECO:0000313|EMBL:ABP73122.1}; TaxID=349102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaer
04302015_34_scaffold_383_9
Rhodobacter sp. AKP1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6455..7396
DNA (942bp) protein (314aa)
Putative mechanosensitive channel protein n=1 Tax=Rhodobacter sp. AKP1 RepID=L1K7H7_9RHOB rbh
Putative mechanosensitive channel protein {ECO:0000313|EMBL:EKX56766.1}; TaxID=1247725 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source=
MscS mechanosensitive ion channel rbh
04302015_34_scaffold_383_10
unknown

Not on your lists

7644..7775
DNA (132bp) protein (44aa)

This feature has no annotations

04302015_34_scaffold_383_11
Oceanibulbus indolifex, Oceanibulbus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8050..8481)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9EFE9_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EDQ03202.1}; TaxID=391624 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanibulbus.;" source="Oceanibulbus indo
hypothetical protein
04302015_34_scaffold_383_12
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8715..9449)
DNA (735bp) protein (245aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacter
pseudouridine synthase; K06183 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
Pseudouridine synthase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYK1_BREDI rbh
04302015_34_scaffold_383_13
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9551..9967)
DNA (417bp) protein (139aa)
GreA/GreB family elongation factor n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LN19_DINSH
GreA/GreB family elongation factor; K06140 regulator of nucleoside diphosphate kinase
GreA/GreB family elongation factor {ECO:0000313|EMBL:ABV92163.1}; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter.;" source="Din
04302015_34_scaffold_383_14
unknown

Not on your lists

comp(10051..10266)
DNA (216bp) protein (72aa)

This feature has no annotations

04302015_34_scaffold_383_15
unknown

Not on your lists

10328..10558
DNA (231bp) protein (77aa)

This feature has no annotations

04302015_34_scaffold_383_16
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10616..11350
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4X0K5_RHOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP73169.1}; TaxID=349102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaer
04302015_34_scaffold_383_17
Roseobacter litoralis, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11830..12231
DNA (402bp) protein (134aa)
Putative multi-pass membrane protein n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZLG6_ROSLO
multi-pass membrane protein; K15270 S-adenosylmethionine uptake transporter
Putative multi-pass membrane protein {ECO:0000313|EMBL:AEI92826.1}; TaxID=391595 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseo
04302015_34_scaffold_383_18
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12275..12583
DNA (309bp) protein (103aa)
Transposase n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XVJ4_PARAH
transposase
Transposase {ECO:0000313|EMBL:AGT11529.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 768
04302015_34_scaffold_383_19

Not on your lists

12670..13119
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZZ39_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD61055.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein; K07483 transposase
04302015_34_scaffold_383_20
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13116..13544
DNA (429bp) protein (143aa)
transposase n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B49C6E
IS66 Orf2 family protein; K07484 transposase
IS66 Orf2 family protein {ECO:0000313|EMBL:ABS13383.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (s
04302015_34_scaffold_383_21

Not on your lists

13492..15111
DNA (1620bp) protein (540aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AX86_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD61063.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Transposase-like protein rbh
Displaying 21 items

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