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04302015_34_scaffold_1056

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_34_scaffold_1056_1
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(107..1129)
DNA (1023bp) protein (341aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAM
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KX68_9BURK rbh
04302015_34_scaffold_1056_2
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1219..2124)
DNA (906bp) protein (302aa)
LytR/AlgR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPM6_9BURK
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:BAO82399.1}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae
LytR/AlgR family transcriptional regulator; K08083 two-component system, LytT family, response regulator AlgR
04302015_34_scaffold_1056_3
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2284..3744
DNA (1461bp) protein (487aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:S
argininosuccinate lyase; K01755 argininosuccinate lyase [EC:4.3.2.1]
Argininosuccinate lyase id=1268858 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
04302015_34_scaffold_1056_4
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3816..4658
DNA (843bp) protein (281aa)
Sigma-54 interaction domain protein n=2 Tax=Burkholderia thailandensis RepID=N0AAZ1_BURTH
MoxR-like ATPase {ECO:0000313|EMBL:BAO82394.1}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium B1.;"
sigma-54 interaction domain protein
04302015_34_scaffold_1056_5
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4695..5885
DNA (1191bp) protein (397aa)
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:BAO82393.1}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadac
Uncharacterized protein id=1308726 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein; K09989 hypothetical protein
04302015_34_scaffold_1056_trna_1
unknown

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5945..6023
DNA (79bp)
transferRNA
04302015_34_scaffold_1056_6
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6067..7314)
DNA (1248bp) protein (416aa)
HD-GYP domain protein {ECO:0000313|EMBL:BAO81786.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
metal dependent phosphohydrolase id=12550875 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
metal dependent phosphohydrolase
04302015_34_scaffold_1056_7
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7628..8011
DNA (384bp) protein (128aa)
Fe(3+)-transporting ATPase (EC:3.6.3.30); K02010 iron(III) transport system ATP-binding protein [EC:3.6.3.30]
ABC transporter-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNC9_9BURK
ABC-type spermidine/putrescine transport systems, ATPase component {ECO:0000313|EMBL:BAO82390.1}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;
Displaying 8 items

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