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04302015_34_scaffold_2504

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_34_scaffold_2504_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(46..630)
DNA (585bp) protein (195aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20); K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20] id=12498279 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
DNA-3-methyladenine glycosylase I (EC:3.2.2.20); K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_34_scaffold_2504_2
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(623..1921)
DNA (1299bp) protein (433aa)
pyrC; dihydroorotase; K01465 dihydroorotase [EC:3.5.2.3] id=5080216 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3]
Dihydroorotase and related cyclic amidohydrolase {ECO:0000313|EMBL:BAO83794.1}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamona
04302015_34_scaffold_2504_3
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1943..2899)
DNA (957bp) protein (319aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1458426 species="Ba
pyrB; aspartate carbamoyltransferase; K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] rbh
Aspartate carbamoyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MND9_9BURK rbh
04302015_34_scaffold_2504_4
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2896..3456)
DNA (561bp) protein (187aa)
Uracil phosphoribosyltransferase (EC:2.4.2.9); K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
Uracil phosphoribosyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8TQI7_ALIDB
Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase {ECO:0000313|EMBL:BAO83796.1}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadace
04302015_34_scaffold_2504_5
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3453..3920)
DNA (468bp) protein (156aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1458426 speci
Holliday junction resolvase-like protein; K07447 putative holliday junction resolvase [EC:3.1.-.-]
Holliday junction resolvase n=1 Tax=Variovorax paradoxus RepID=UPI0003718939
04302015_34_scaffold_2504_6
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3917..4711)
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KUC8_9BURK
UPF0301 protein SMCB_1570 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium B1
hypothetical protein; K07735 putative transcriptional regulator
04302015_34_scaffold_2504_7
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4729..4872
DNA (144bp) protein (48aa)
deoxyribodipyrimidine photo-lyase (EC:4.1.99.3); K01669 deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Deoxyribodipyrimidine photo-lyase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WIY4_DELAC
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:BAO83799.1}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium
Displaying 7 items

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