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04302015_34_scaffold_550

Search features with annotation key words

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_34_scaffold_550_1
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56..940)
DNA (885bp) protein (295aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Acidiphilium RepID=A5FWU6_ACICJ
diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EGO95037.1}; Flags: Fragment;; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiph
04302015_34_scaffold_550_2
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(928..2088)
DNA (1161bp) protein (387aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Acidiphilium RepID=A5FWU6_ACICJ
diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ABQ30078.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Aci
04302015_34_scaffold_550_3
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2516..3733)
DNA (1218bp) protein (406aa)
glutaryl-CoA dehydrogenase (EC:1.3.99.7); K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7]
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:EGO94592.1}; EC=1.3.8.6 {ECO:0000313|EMBL:EGO94592.1};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodosp
Acyl-CoA dehydrogenase domain protein n=3 Tax=Acidiphilium RepID=A5FWU4_ACICJ
04302015_34_scaffold_550_4
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3730..5376)
DNA (1647bp) protein (549aa)
ATP-dependent RNA helicase (EC:3.6.4.13)
ATP-dependent RNA helicase {ECO:0000313|EMBL:BAJ80404.1}; EC=3.6.4.13 {ECO:0000313|EMBL:BAJ80404.1};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacter
ATP-dependent RNA helicase n=2 Tax=Acidiphilium RepID=F0IWZ4_ACIMA
04302015_34_scaffold_550_5
unknown

Not on your lists

comp(5466..6479)
DNA (1014bp) protein (338aa)

This feature has no annotations

04302015_34_scaffold_550_6
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(6479..7552)
DNA (1074bp) protein (358aa)
UPI0003CE00B3 related cluster n=1 Tax=unknown RepID=UPI0003CE00B3
Putative uncharacterized protein {ECO:0000313|EMBL:EGJ31419.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
hypothetical protein
04302015_34_scaffold_550_7
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7736..8464
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZP56_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKN01061.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX
hypothetical protein
04302015_34_scaffold_550_8
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8479..9942)
DNA (1464bp) protein (488aa)
Glycosyl transferase, group 1 n=3 Tax=Acidiphilium RepID=A5FWU1_ACICJ
putative glycosyltransferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABQ30073.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphili
04302015_34_scaffold_550_9
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10221..11198
DNA (978bp) protein (326aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1052004 species="Bacte
GDP-mannose 4,6 dehydratase (EC:4.2.1.47); K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47]
GDP-mannose 4,6-dehydratase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BPK0_GRABC
04302015_34_scaffold_550_10
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11198..12115
DNA (918bp) protein (306aa)
rmd; GDP-6-deoxy-D-lyxo-4-hexulose reductase (EC:1.1.1.281)
GDP-6-deoxy-D-lyxo-4-hexulose reductase {ECO:0000313|EMBL:BAJ79929.1}; EC=1.1.1.281 {ECO:0000313|EMBL:BAJ79929.1};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillale
GDP-6-deoxy-D-lyxo-4-hexulose reductase n=2 Tax=Acidiphilium RepID=F0J3S3_ACIMA
04302015_34_scaffold_550_11
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12178..13131)
DNA (954bp) protein (318aa)
Putative oxidoreductase n=2 Tax=Acidiphilium RepID=F0J3A9_ACIMA
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAJ82055.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium mul
04302015_34_scaffold_550_12
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13137..14363)
DNA (1227bp) protein (409aa)
Putative oxidoreductase n=2 Tax=Acidiphilium RepID=F0J3A9_ACIMA
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAJ82055.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium mul
04302015_34_scaffold_550_13
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14536..15000
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0IZF9_ACIMA
hypothetical protein
Nitrogen fixing thioredoxin-like protein NifU {ECO:0000313|EMBL:GAN77058.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" s
04302015_34_scaffold_550_14
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15058..15642
DNA (585bp) protein (195aa)
hypothetical protein; K09019 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
Putative NADH dehydrogenase/NAD(P)H nitroreductase ACIDI_96c00420 {ECO:0000256|HAMAP-Rule:MF_01204}; EC=1.-.-.- {ECO:0000256|HAMAP-Rule:MF_01204};; TaxID=1464546 species="Bacteria; Proteobacteria; Alp
Putative NADH dehydrogenase/NAD(P)H nitroreductase Acry_1774 n=3 Tax=Acidiphilium RepID=A5FZE5_ACICJ
04302015_34_scaffold_550_15
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15642..16316
DNA (675bp) protein (225aa)
Peptidase M22 family protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0IZF7_ACIMA
peptidase M22 family protein
Peptidase M22 family protein {ECO:0000313|EMBL:BAJ81167.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphiliu
04302015_34_scaffold_550_16
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16324..16800
DNA (477bp) protein (159aa)
ribosomal-protein-alanine acetyltransferase; K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128]
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000369566E
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:ABQ30975.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" sour
04302015_34_scaffold_550_17
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16902..17954)
DNA (1053bp) protein (351aa)
nrdF; ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1); K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; R
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FWH6_ACICJ
04302015_34_scaffold_550_18
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18048..18815)
DNA (768bp) protein (256aa)
enoyl-CoA hydratase (EC:4.2.1.17); K01692 enoyl-CoA hydratase [EC:4.2.1.17]
Enoyl-CoA hydratase {ECO:0000313|EMBL:BAJ80844.1}; EC=4.2.1.17 {ECO:0000313|EMBL:BAJ80844.1};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae;
Enoyl-CoA hydratase n=2 Tax=Acidiphilium RepID=F0IYI4_ACIMA
04302015_34_scaffold_550_19
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18874..19515)
DNA (642bp) protein (214aa)
fatty acid hydroxylase n=1 Tax=Laceyella sacchari RepID=UPI0003B607A0
Fatty acid hydroxylase FAH1P {ECO:0000313|EMBL:EGK08933.1}; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="Desmospora sp. 8437.;"
hypothetical protein
04302015_34_scaffold_550_20
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19505..21454)
DNA (1950bp) protein (650aa)
squalene-hopene cyclase; K06045 squalene-hopene cyclase [EC:5.4.99.17 4.2.1.129]
Squalene--hopene cyclase {ECO:0000313|EMBL:EGO95246.1}; EC=5.4.99.17 {ECO:0000313|EMBL:EGO95246.1};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacter
Squalene-hopene cyclase n=3 Tax=Acidiphilium RepID=A5FZ58_ACICJ
04302015_34_scaffold_550_21
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21851..22240
DNA (390bp) protein (130aa)
thyX; flavin-dependent thymidylate synthase (EC:2.1.1.148); K03465 thymidylate synthase (FAD) [EC:2.1.1.148]
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408}
Thymidylate synthase ThyX n=1 Tax=Acidiphilium sp. PM RepID=F7SBE8_9PROT
04302015_34_scaffold_550_22
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22260..22739
DNA (480bp) protein (160aa)
thyX; flavin-dependent thymidylate synthase (EC:2.1.1.148); K03465 thymidylate synthase (FAD) [EC:2.1.1.148]
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408}
Thymidylate synthase ThyX n=2 Tax=Acidiphilium RepID=F0J134_ACIMA
04302015_34_scaffold_550_23
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22876..24111
DNA (1236bp) protein (412aa)
hemA; 5-aminolevulinate synthase (EC:2.3.1.37); K00643 5-aminolevulinate synthase [EC:2.3.1.37]
5-aminolevulinate synthase {ECO:0000256|RuleBase:RU910713}; EC=2.3.1.37 {ECO:0000256|RuleBase:RU910713};; 5-aminolevulinic acid synthase {ECO:0000256|RuleBase:RU910713}; Delta-ALA synthase {ECO:000025
5-aminolevulinate synthase n=2 Tax=Acidiphilium RepID=F0J133_ACIMA
04302015_34_scaffold_550_trna_1
unknown

Not on your lists

24162..24233
DNA (72bp)
transferRNA
04302015_34_scaffold_550_24
unknown

Not on your lists

24647..24883
DNA (237bp) protein (79aa)

This feature has no annotations

Displaying 25 items

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