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04302015_34_scaffold_300

Search features with annotation key words

Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_34_scaffold_300_1
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

507..1160
DNA (654bp) protein (218aa)
Aldehyde dehydrogenase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FTB4_ACICJ
TrwC relaxase/toprim domain/AAA domain containing protein {ECO:0000313|EMBL:KDM68381.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidi
aldehyde dehydrogenase
04302015_34_scaffold_300_2
unknown

Not on your lists

comp(2071..2763)
DNA (693bp) protein (231aa)

This feature has no annotations

04302015_34_scaffold_300_3
unknown

Not on your lists

comp(2756..3190)
DNA (435bp) protein (145aa)

This feature has no annotations

04302015_34_scaffold_300_4
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3187..5013)
DNA (1827bp) protein (609aa)
TRAG family protein n=1 Tax=Acidiphilium sp. PM RepID=F7SC78_9PROT rbh
Conjugal transfer coupling protein TraG {ECO:0000313|EMBL:GAN81157.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="A
traG; putative conjugal transfer protein TraG; K03205 type IV secretion system protein VirD4 rbh
04302015_34_scaffold_300_5
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5013..5756)
DNA (744bp) protein (248aa)
Type II secretion system protein E n=1 Tax=Acidiphilium sp. PM RepID=F7SC42_9PROT rbh
Type II secretion system protein E {ECO:0000313|EMBL:KDM65129.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acid
virB11; type IV secretion system VirB11; K03196 type IV secretion system protein VirB11 rbh
04302015_34_scaffold_300_6
unknown

Not on your lists

comp(6056..6406)
DNA (351bp) protein (117aa)

This feature has no annotations

04302015_34_scaffold_300_7
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6403..7536)
DNA (1134bp) protein (378aa)
Type IV secretion system VirB10 n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J7S0_ACIMA rbh
virB10; type IV secretion system VirB10; K03195 type IV secretion system protein VirB10 rbh
Type IV secretion system VirB10 {ECO:0000313|EMBL:BAJ83137.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphi
04302015_34_scaffold_300_8
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7526..8431)
DNA (906bp) protein (302aa)
Type IV secretion system VirB9 n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J7S1_ACIMA rbh
virB9; type IV secretion system VirB9; K03204 type IV secretion system protein VirB9 rbh
Type IV secretion system VirB9 {ECO:0000313|EMBL:BAJ83138.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphil
04302015_34_scaffold_300_9
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8428..9129)
DNA (702bp) protein (234aa)
Type IV secretion system VirB8 n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J7S2_ACIMA rbh
virB8; type IV secretion system VirB8; K03203 type IV secretion system protein VirB8 rbh
Type IV secretion system VirB8 {ECO:0000313|EMBL:BAJ83139.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphil
04302015_34_scaffold_300_10
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9126..9299)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J7S3_ACIMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ83140.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium mul
04302015_34_scaffold_300_11
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9299..10318)
DNA (1020bp) protein (340aa)
Type IV secretion system VirB6 n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J782_ACIMA
Type IV secretion system VirB6 {ECO:0000313|EMBL:KDM66061.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphi
virB6; type IV secretion system VirB6; K03201 type IV secretion system protein VirB6
04302015_34_scaffold_300_12
unknown

Not on your lists

comp(10315..10542)
DNA (228bp) protein (76aa)

This feature has no annotations

04302015_34_scaffold_300_13
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10539..11288)
DNA (750bp) protein (250aa)
Type IV secretion system VirB5 n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J781_ACIMA
virB5; type IV secretion system VirB5; K03200 type IV secretion system protein VirB5
Type IV secretion system VirB5 {ECO:0000313|EMBL:BAJ82948.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphil
04302015_34_scaffold_300_14
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11301..13694)
DNA (2394bp) protein (798aa)
Type IV secretion system VirB4 n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J7S7_ACIMA rbh
virB4; type IV secretion system VirB4; K03199 type IV secretion system protein VirB4 rbh
Type IV secretion system VirB4 {ECO:0000313|EMBL:BAJ83144.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphil
04302015_34_scaffold_300_15
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13684..14013)
DNA (330bp) protein (110aa)
Type IV secretory pathway VirB3 family protein n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UMA6_SINMW
type IV secretion system protein VirB3; K03198 type IV secretion system protein VirB3
Type IV secretory pathway VirB3 family protein {ECO:0000313|EMBL:ABR64786.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer grou
04302015_34_scaffold_300_16
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14018..14383)
DNA (366bp) protein (122aa)
Type IV secretion system VirB2 n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J7S9_ACIMA
virB2; type IV secretion system VirB2; K03197 type IV secretion system protein VirB2
Type IV secretion system VirB2 {ECO:0000313|EMBL:BAJ83146.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphil
04302015_34_scaffold_300_17
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14343..15110)
DNA (768bp) protein (256aa)
Lytic transglycosylase, catalytic n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FU38_ACICJ
lytic transglycosylase, catalytic; K03194 type IV secretion system protein VirB1
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:ABQ29120.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphiliu
04302015_34_scaffold_300_18
unknown

Not on your lists

comp(15107..15661)
DNA (555bp) protein (185aa)

This feature has no annotations

04302015_34_scaffold_300_19
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15658..16062)
DNA (405bp) protein (135aa)
Xre family transcriptional regulator n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J7T2_ACIMA
Transcriptional regulator XRE {ECO:0000313|EMBL:GAN81143.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella
Xre family transcriptional regulator
04302015_34_scaffold_300_20
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16551..17855
DNA (1305bp) protein (435aa)
Replication protein C n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FU36_ACICJ rbh
replication protein C rbh
Replication protein C {ECO:0000313|EMBL:ABQ29118.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium crypt
04302015_34_scaffold_300_21
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17988..18677
DNA (690bp) protein (230aa)
Partition protein ParA n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TSN9_TISMK
parA; partition protein ParA
Partition protein ParA {ECO:0000313|EMBL:AFK55777.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis
04302015_34_scaffold_300_22
unknown

Not on your lists

18677..18985
DNA (309bp) protein (103aa)

This feature has no annotations

04302015_34_scaffold_300_23
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19150..19857
DNA (708bp) protein (236aa)
NERD domain-containing protein n=1 Tax=Acidiphilium sp. PM RepID=F7SC99_9PROT
NERD domain-containing protein {ECO:0000313|EMBL:EGO93219.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphi
NERD domain-containing protein
04302015_34_scaffold_300_24
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19918..20148
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J7M2_ACIMA
Uncharacterized protein {ECO:0000313|EMBL:GAN81134.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminol
hypothetical protein
04302015_34_scaffold_300_25
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20145..20906
DNA (762bp) protein (254aa)
Adenosine monophosphate-protein transferase BepA {ECO:0000313|EMBL:KDM68275.1}; EC=2.7.7.n1 {ECO:0000313|EMBL:KDM68275.1};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodos
Filamentation induced by cAMP protein Fic n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X7M7_OCHA4
filamentation induced by cAMP protein Fic; K04095 cell filamentation protein
04302015_34_scaffold_300_26
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21157..21345
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J7J9_ACIMA
Uncharacterized protein {ECO:0000313|EMBL:GAN81132.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminol
hypothetical protein
04302015_34_scaffold_300_27
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21335..22069
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FTF0_ACICJ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABQ28882.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cry
Displaying 27 items

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