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04302015_34_scaffold_21

Search features with annotation key words

Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_34_scaffold_21_1
unknown

Not on your lists

451..1071
DNA (621bp) protein (207aa)

This feature has no annotations

04302015_34_scaffold_21_2
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1221..1805
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NTG5_AZOS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI71694.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp
04302015_34_scaffold_21_3
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1929..4796)
DNA (2868bp) protein (956aa)
UvrABC system protein A n=2 Tax=Acidiphilium RepID=A5G064_ACICJ rbh
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_0
uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A rbh
04302015_34_scaffold_21_4
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5094..5597
DNA (504bp) protein (168aa)
Single-stranded DNA-binding protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J0U4_ACIMA
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1120923 species="Bacteria; Proteobacteria; Alp
ssb; single-stranded DNA-binding protein; K03111 single-strand DNA-binding protein
04302015_34_scaffold_21_5
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5627..8680)
DNA (3054bp) protein (1018aa)
Acriflavin resistance protein n=1 Tax=Acidiphilium sp. PM RepID=F7S3L0_9PROT rbh
Acriflavin resistance protein {ECO:0000313|EMBL:EGO96264.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphil
acriflavin resistance protein rbh
04302015_34_scaffold_21_6
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8680..9708)
DNA (1029bp) protein (343aa)
HlyD family secretion protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J2P8_ACIMA rbh
HlyD family secretion protein rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABQ29536.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; A
04302015_34_scaffold_21_7
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9705..11111)
DNA (1407bp) protein (469aa)
Putative outer membrane efflux protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J2P9_ACIMA
putative outer membrane efflux protein
Putative outer membrane efflux protein {ECO:0000313|EMBL:BAJ79688.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="A
04302015_34_scaffold_21_8
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11239..11934
DNA (696bp) protein (232aa)
Two-component response regulator n=2 Tax=Acidiphilium RepID=F0J2Q0_ACIMA rbh
Transcriptional activator protein CopR {ECO:0000313|EMBL:KDM67701.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="
two-component response regulator rbh
04302015_34_scaffold_21_9
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11924..13294
DNA (1371bp) protein (457aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FVA7_ACICJ rbh
integral membrane sensor signal transduction histidine kinase rbh
04302015_34_scaffold_21_10
Dermacoccus sp. Ellin185, Dermacoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13312..14361)
DNA (1050bp) protein (350aa)
Malate/L-lactate dehydrogenase n=1 Tax=Dermacoccus sp. Ellin185 RepID=E3B877_9MICO
Malate/L-lactate dehydrogenase {ECO:0000313|EMBL:EFP58760.1}; TaxID=188626 species="Bacteria; Actinobacteria; Micrococcales; Dermacoccaceae; Dermacoccus.;" source="Dermacoccus sp. Ellin185.;"
ybiC; malate dehydrogenase
04302015_34_scaffold_21_11
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14361..14693)
DNA (333bp) protein (111aa)
NIPSNAP family containing protein n=2 Tax=Acidiphilium RepID=A5FZJ1_ACICJ
NIPSNAP family protein
NIPSNAP family containing protein {ECO:0000313|EMBL:ABQ31023.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidip
04302015_34_scaffold_21_12
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14771..16069)
DNA (1299bp) protein (433aa)
L-sorbosone dehydrogenase (EC:1.1.1.-) rbh
L-sorbosone dehydrogenase {ECO:0000313|EMBL:KDM65181.1}; EC=1.1.1.- {ECO:0000313|EMBL:KDM65181.1};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobactera
L-sorbosone dehydrogenase n=2 Tax=Acidiphilium RepID=F0J5L6_ACIMA rbh
04302015_34_scaffold_21_13
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16173..16514)
DNA (342bp) protein (114aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales
Carboxymuconolactone decarboxylase family protein n=2 Tax=Acidiphilium RepID=F0IXF8_ACIMA
carboxymuconolactone decarboxylase family protein
04302015_34_scaffold_21_14

Not on your lists

comp(16609..17808)
DNA (1200bp) protein (400aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=mine drainage metagenome RepID=T1ADG0_9ZZZZ rbh
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:EQD55142.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;
putative sensory box histidine kinase
04302015_34_scaffold_21_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17805..19142)
DNA (1338bp) protein (446aa)
chemotaxis protein CheY n=1 Tax=Dyella ginsengisoli RepID=UPI00034BD6B9 rbh
zraR; sigma-54 dependent DNA-binding response regulator
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
04302015_34_scaffold_21_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19191..21617)
DNA (2427bp) protein (809aa)
Permease (Fragment) n=1 Tax=mine drainage metagenome RepID=T1C8S0_9ZZZZ
Permease {ECO:0000313|EMBL:AHG88554.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
permease
04302015_34_scaffold_21_17

Not on your lists

comp(21614..22357)
DNA (744bp) protein (248aa)
ABC transporter-like domain protein n=1 Tax=mine drainage metagenome RepID=T1AZN2_9ZZZZ rbh
ABC transporter-like domain protein {ECO:0000313|EMBL:EQD61818.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ABC transporter; K02003 putative ABC transport system ATP-binding protein
04302015_34_scaffold_21_18

Not on your lists

comp(22360..23721)
DNA (1362bp) protein (454aa)
Type I secretion outer membrane protein, TolC n=2 Tax=mine drainage metagenome RepID=T1ACQ4_9ZZZZ
Type I secretion outer membrane protein, TolC {ECO:0000313|EMBL:EQD54413.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
tolC; putative outer membrane protein; K12340 outer membrane channel protein
04302015_34_scaffold_21_19

Not on your lists

comp(23739..25007)
DNA (1269bp) protein (423aa)
Efflux transporter, RND family, MFP subunit (Fragment) n=1 Tax=mine drainage metagenome RepID=T1AEB4_9ZZZZ
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EQD55467.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage
RND family efflux transporter MFP subunit
04302015_34_scaffold_21_20
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25197..27215)
DNA (2019bp) protein (673aa)
methylcrotonoyl-CoA carboxylase alpha subunit (EC:6.4.1.4); K01968 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] rbh
Acetyl-/propionyl-coenzyme A carboxylase alpha chain {ECO:0000313|EMBL:KDM67833.1}; EC=6.3.4.14 {ECO:0000313|EMBL:KDM67833.1};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rh
3-methylcrotonoyl-CoA carboxylase, alpha subunit n=3 Tax=Acidiphilium RepID=A5FYP0_ACICJ rbh
04302015_34_scaffold_21_21
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27219..28007)
DNA (789bp) protein (263aa)
putative enoyl-CoA hydratase (EC:4.2.1.17); K13766 methylglutaconyl-CoA hydratase [EC:4.2.1.18] rbh
Putative enoyl-CoA hydratase {ECO:0000313|EMBL:BAJ80907.1}; EC=4.2.1.17 {ECO:0000313|EMBL:BAJ80907.1};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobact
Putative enoyl-CoA hydratase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0IYP7_ACIMA rbh
04302015_34_scaffold_21_22
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28013..29620)
DNA (1608bp) protein (536aa)
propionyl-CoA carboxylase (EC:6.4.1.3); K01969 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] rbh
Propionyl-CoA carboxylase {ECO:0000313|EMBL:ABQ30724.1}; EC=6.4.1.3 {ECO:0000313|EMBL:ABQ30724.1};; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacterac
Propionyl-CoA carboxylase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FYP2_ACICJ rbh
04302015_34_scaffold_21_23
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29721..31043)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FYP4_ACICJ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABQ30726.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" sourc
04302015_34_scaffold_21_24
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31202..32146
DNA (945bp) protein (315aa)
Glycosyl transferase, family 2 n=3 Tax=Acidiphilium RepID=A5FYP5_ACICJ rbh
putative glycosyltransferase rbh
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABQ30727.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphil
04302015_34_scaffold_21_25
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32146..33138
DNA (993bp) protein (331aa)
putative acyltransferase (EC:2.3.1.-) rbh
Putative acyltransferase {ECO:0000313|EMBL:KDM67827.1}; EC=2.3.1.- {ECO:0000313|EMBL:KDM67827.1};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacterac
Acyltransferase 3 n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FYP6_ACICJ rbh
04302015_34_scaffold_21_26
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33146..33358
DNA (213bp) protein (71aa)
Uncharacterized protein n=2 Tax=Acidiphilium RepID=A5FYP7_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ30729.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cry
04302015_34_scaffold_21_27
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33316..34770)
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0IYQ4_ACIMA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAJ80914.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium mul
04302015_34_scaffold_21_28
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34748..36928)
DNA (2181bp) protein (727aa)
non-specific protein-tyrosine kinase (EC:2.7.10.2); K08253 non-specific protein-tyrosine kinase [EC:2.7.10.2] rbh
Non-specific protein-tyrosine kinase {ECO:0000313|EMBL:ABQ30731.1}; EC=2.7.10.2 {ECO:0000313|EMBL:ABQ30731.1};; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; A
Non-specific protein-tyrosine kinase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FYP9_ACICJ rbh
04302015_34_scaffold_21_29
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37088..37678
DNA (591bp) protein (197aa)
Polysaccharide export protein n=3 Tax=Acidiphilium RepID=A5FYQ0_ACICJ
polysaccharide export protein; K01991 polysaccharide export outer membrane protein
Polysaccharide export protein {ECO:0000313|EMBL:BAJ80916.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphili
04302015_34_scaffold_21_30
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37900..38859
DNA (960bp) protein (320aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodo
malonyl CoA-acyl carrier protein transacylase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] rbh
Malonyl CoA-acyl carrier protein transacylase n=2 Tax=Acidiphilium RepID=A5FYQ1_ACICJ rbh
Displaying items 1-30 of 35 in total

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