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04302015_34_scaffold_24

Search features with annotation key words

Displaying items 1-30 of 62 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_34_scaffold_24_1
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(324..1793)
DNA (1470bp) protein (490aa)
Putative flavoprotein involved in K+ transport n=1 Tax=Caulobacter sp. AP07 RepID=J2ZTA2_9CAUL
flavin-binding family monooxygenase
Putative flavoprotein involved in K+ transport {ECO:0000313|EMBL:EJL21974.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" so
04302015_34_scaffold_24_2
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1800..2555)
DNA (756bp) protein (252aa)
aldolase (EC:4.1.2.-); K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-] rbh
Aldolase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J2D9_ACIMA rbh
HpcH/HpaI aldolase {ECO:0000313|EMBL:ABQ31480.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum
04302015_34_scaffold_24_3
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2567..4060)
DNA (1494bp) protein (498aa)
mmsA; methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27); K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] rbh
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:BAJ82712.1}; EC=1.2.1.27 {ECO:0000313|EMBL:BAJ82712.1};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillal
Methylmalonate-semialdehyde dehydrogenase n=2 Tax=Acidiphilium RepID=F0IXE7_ACIMA rbh
04302015_34_scaffold_24_4
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4192..5439
DNA (1248bp) protein (416aa)
Amidase {ECO:0000313|EMBL:EGO94053.1}; EC=3.5.1.87 {ECO:0000313|EMBL:EGO94053.1};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphiliu
amidase (EC:3.5.1.87); K06016 N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.87] rbh
Amidase n=1 Tax=Acidiphilium sp. PM RepID=F7S9W1_9PROT rbh
04302015_34_scaffold_24_5
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5479..6318
DNA (840bp) protein (280aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IQZ3_METNO rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:EWY37571.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella s
short-chain dehydrogenase/reductase SDR rbh
04302015_34_scaffold_24_6
unknown

Not on your lists

6403..6537
DNA (135bp) protein (45aa)

This feature has no annotations

04302015_34_scaffold_24_7
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6531..6938
DNA (408bp) protein (136aa)
Uncharacterized protein n=3 Tax=Acidiphilium RepID=A5G2Y3_ACICJ
hypothetical protein; K09004 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ32215.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" sourc
04302015_34_scaffold_24_8
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7007..8266)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J3E8_ACIMA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAJ82094.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium mul
04302015_34_scaffold_24_9
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8263..9036)
DNA (774bp) protein (258aa)
hyi; hydroxypyruvate isomerase (EC:5.3.1.22); K01816 hydroxypyruvate isomerase [EC:5.3.1.22] rbh
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobac
Hydroxypyruvate isomerase n=2 Tax=Acidiphilium RepID=F0J3E9_ACIMA rbh
04302015_34_scaffold_24_10
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9095..9997)
DNA (903bp) protein (301aa)
3-hydroxyisobutyrate dehydrogenase n=3 Tax=Acidiphilium RepID=A5G192_ACICJ rbh
putative oxidoreductase rbh
Putative oxidoreductase {ECO:0000313|EMBL:KDM65422.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp
04302015_34_scaffold_24_11
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10077..11126)
DNA (1050bp) protein (350aa)
alanine racemase (EC:5.1.1.1); K06145 LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor rbh
Transcriptional regulator, LacI family n=2 Tax=Acidiphilium RepID=A5G193_ACICJ rbh
HTH-type transcriptional regulator GntR {ECO:0000313|EMBL:KDM65423.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source=
04302015_34_scaffold_24_12
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11320..12900
DNA (1581bp) protein (527aa)
ABC transporter ATP-binding protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
sugar ABC transporter ATP-binding protein n=1 Tax=Humibacter albus RepID=UPI0003B6B18C rbh
Uncharacterized protein {ECO:0000313|EMBL:KDB04323.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas s
04302015_34_scaffold_24_13
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12897..13883
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Humibacter albus RepID=UPI0003B2EE42
Uncharacterized protein {ECO:0000313|EMBL:KDB04324.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas s
inner-membrane translocator; K10556 AI-2 transport system permease protein
04302015_34_scaffold_24_14
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13880..14896
DNA (1017bp) protein (339aa)
ABC transporter permease n=1 Tax=Humibacter albus RepID=UPI0003B5AD50
Uncharacterized protein {ECO:0000313|EMBL:KDB04325.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas s
inner-membrane translocator; K10557 AI-2 transport system permease protein
04302015_34_scaffold_24_15
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14943..15929
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Humibacter albus RepID=UPI0003B7628A
Uncharacterized protein {ECO:0000313|EMBL:KDB04326.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas s
ABC transporter, solute-binding, sugar transport; K10555 AI-2 transport system substrate-binding protein
04302015_34_scaffold_24_16
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15986..16873
DNA (888bp) protein (296aa)
UPI0003D00201 related cluster n=1 Tax=unknown RepID=UPI0003D00201 rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:CDX13462.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesor
NAD-dependent epimerase/dehydratase rbh
04302015_34_scaffold_24_17
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16941..17837
DNA (897bp) protein (299aa)
6-phosphogluconate dehydrogenase, NAD-binding {ECO:0000313|EMBL:EGO95102.1}; EC=1.1.1.60 {ECO:0000313|EMBL:EGO95102.1};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospir
6-phosphogluconate dehydrogenase, NAD-binding protein n=3 Tax=Acidiphilium RepID=A5G194_ACICJ rbh
putative oxidoreductase rbh
04302015_34_scaffold_24_18
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17834..18472
DNA (639bp) protein (213aa)
Class II aldolase/adducin family protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G195_ACICJ rbh
putative aldolase rbh
Class II aldolase/adducin family protein {ECO:0000313|EMBL:ABQ31627.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source=
04302015_34_scaffold_24_19
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18642..18917
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z3L4_AZOL4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS87974.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum li
04302015_34_scaffold_24_20
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18920..19309
DNA (390bp) protein (130aa)
putative plasmid maintenance toxin (MazE-like); K07171 mRNA interferase [EC:3.1.-.-]
Putative plasmid maintenance toxin (MazE-like) n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z3L5_AZOL4
Putative plasmid maintenance toxin (MazE-like) {ECO:0000313|EMBL:CBS87975.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;"
04302015_34_scaffold_24_21
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19313..19891)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G197_ACICJ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABQ31629.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cry
04302015_34_scaffold_24_22
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20038..21519
DNA (1482bp) protein (494aa)
Major facilitator superfamily MFS_1 n=3 Tax=Acidiphilium RepID=A5G198_ACICJ rbh
putative major facilitator superfamily transporter rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABQ31630.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acid
04302015_34_scaffold_24_23
unknown

Not on your lists

21747..22364
DNA (618bp) protein (206aa)

This feature has no annotations

04302015_34_scaffold_24_24
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22493..22888)
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Acidiphilium RepID=A5G277_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ31959.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" sourc
04302015_34_scaffold_24_25
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22981..24651
DNA (1671bp) protein (557aa)
formate--tetrahydrofolate ligase (EC:6.3.4.3); K01938 formate--tetrahydrofolate ligase [EC:6.3.4.3] rbh
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=926570 spe
Formate--tetrahydrofolate ligase n=2 Tax=Acidiphilium RepID=FTHS_ACICJ rbh
04302015_34_scaffold_24_26
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24724..25716
DNA (993bp) protein (331aa)
Uncharacterized protein n=2 Tax=Acidiphilium RepID=F0J3A0_ACIMA rbh
Uncharacterized protein {ECO:0000313|EMBL:KDM65410.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp
hypothetical protein rbh
04302015_34_scaffold_24_27
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25720..26703)
DNA (984bp) protein (328aa)
aldo/keto reductase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDDC2
Aldo/keto reductase {ECO:0000313|EMBL:AIT06364.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.
aldo/keto reductase
04302015_34_scaffold_24_28
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26824..27681)
DNA (858bp) protein (286aa)
ABC transporter related protein n=3 Tax=Acidiphilium RepID=A5FWI0_ACICJ rbh
ABC transporter O-antigene exporter ATP-binding protein {ECO:0000313|EMBL:GAN78816.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidoce
O-antigen ABC transporter ATP-binding protein; K09691 lipopolysaccharide transport system ATP-binding protein rbh
04302015_34_scaffold_24_29
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27686..28648)
DNA (963bp) protein (321aa)
O-antigen ABC transporter permease protein n=2 Tax=Acidiphilium RepID=F0IX68_ACIMA
O-antigen ABC transporter permease; K09690 lipopolysaccharide transport system permease protein
O-antigen ABC transporter permease protein {ECO:0000313|EMBL:BAJ80478.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" sourc
04302015_34_scaffold_24_30
unknown

Not on your lists

comp(28722..29117)
DNA (396bp) protein (132aa)

This feature has no annotations

Displaying items 1-30 of 62 in total

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