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04302015_34_scaffold_736

Search features with annotation key words

Displaying 11 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_34_scaffold_736_1
unknown

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comp(69..383)
DNA (315bp) protein (105aa)

This feature has no annotations

04302015_34_scaffold_736_2
unknown

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554..784
DNA (231bp) protein (77aa)

This feature has no annotations

04302015_34_scaffold_736_3
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(852..1178)
DNA (327bp) protein (109aa)
DNA polymerase beta domain protein region n=2 Tax=Chloroflexus RepID=A9WGW0_CHLAA
DNA polymerase subunit beta
DNA polymerase beta domain protein region {ECO:0000313|EMBL:ABY36276.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" so
04302015_34_scaffold_736_4
BJP_08E140C01_10KDA_Chromatiales_49_130, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1222..1488)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome PF34_9ZZZZ">RepID=E6PF34_9ZZZZ
nucleotidyltransferase substrate binding protein
Tax=BJP_08E140C01_10KDA_Chromatiales_49_130
04302015_34_scaffold_736_5
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1652..3049)
DNA (1398bp) protein (466aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=3 Tax=Acidiphilium RepID=A5G054_ACICJ rbh
ntrX; nitrogen assimilation regulatory protein NtrX; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX rbh
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABQ31236.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacter
04302015_34_scaffold_736_6
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3058..5271)
DNA (2214bp) protein (738aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae
ntrY; nitrogen regulation protein NtrY (EC:2.7.13.3); K13598 two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] rbh
Multi-sensor signal transduction histidine kinase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G053_ACICJ rbh
04302015_34_scaffold_736_7
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5294..6757)
DNA (1464bp) protein (488aa)
Nitrogen assimilation regulatory protein NtrC n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J0U0_ACIMA rbh
ntrC; nitrogen assimilation regulatory protein NtrC; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG rbh
Nitrogen assimilation regulatory protein NtrC {ECO:0000313|EMBL:KDM66865.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" s
04302015_34_scaffold_736_8
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6757..7902)
DNA (1146bp) protein (382aa)
ntrB; nitrogen regulation protein NtrB (EC:2.7.13.3); K07708 two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae;
PAS/PAC sensor signal transduction histidine kinase n=3 Tax=Acidiphilium RepID=A5G051_ACICJ rbh
04302015_34_scaffold_736_9
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7899..8972)
DNA (1074bp) protein (358aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetob
tRNA-dihydrouridine synthase n=2 Tax=Acidiphilium RepID=A5G050_ACICJ rbh
nifR3 family TIM-barrel protein rbh
04302015_34_scaffold_736_10
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9101..9616
DNA (516bp) protein (172aa)
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12); K01770 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J0T7_ACIMA
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E
04302015_34_scaffold_736_11
Acinetobacter indicus, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9719..9850
DNA (132bp) protein (44aa)
Uncharacterized protein n=2 Tax=Acinetobacter indicus RepID=S3MZJ3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESK46079.1}; TaxID=1341679 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter indi
kinase
Displaying 11 items

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