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04302015_34_scaffold_156

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_34_scaffold_156_1
Alishewanella jeotgali, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..2214
DNA (2214bp) protein (738aa)
P-type HAD superfamily ATPase n=1 Tax=Alishewanella jeotgali KCTC 22429 RepID=H3ZB16_9ALTE rbh
P-type HAD superfamily ATPase {ECO:0000313|EMBL:EHR42130.1}; TaxID=1129374 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewan
P-type HAD superfamily ATPase rbh
04302015_34_scaffold_156_2
Alishewanella agri, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2352..3827)
DNA (1476bp) protein (492aa)
Putative integral membrane protein n=1 Tax=Alishewanella agri BL06 RepID=I8UAY2_9ALTE rbh
Putative integral membrane protein {ECO:0000313|EMBL:EIW90421.1}; TaxID=1195246 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alis
hypothetical protein rbh
04302015_34_scaffold_156_3
Alishewanella agri, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4116..4574
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Alishewanella agri BL06 RepID=I9DW54_9ALTE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIW90420.1}; TaxID=1195246 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanella a
04302015_34_scaffold_156_4
Alishewanella agri, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5023..6474
DNA (1452bp) protein (484aa)
Putative sensor histidine kinase with a response regulator receiver domain n=1 Tax=Alishewanella agri BL06 RepID=I8UEJ2_9ALTE rbh
Putative sensor histidine kinase with a response regulator receiver domain {ECO:0000313|EMBL:EIW90418.1}; TaxID=1195246 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alterom
putative sensor histidine kinase with a response regulator receiver domain
04302015_34_scaffold_156_5
Alishewanella agri, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6471..7145)
DNA (675bp) protein (225aa)
ribosomal large subunit pseudouridine synthase A (EC:4.2.1.70); K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Ribosomal large subunit pseudouridine synthase A n=1 Tax=Alishewanella agri BL06 RepID=I9P5W4_9ALTE rbh
Ribosomal large subunit pseudouridine synthase A {ECO:0000313|EMBL:EIW90417.1}; TaxID=1195246 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;
04302015_34_scaffold_156_6
Alishewanella agri, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7251..7949
DNA (699bp) protein (233aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1195246 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonad
pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Pseudouridine synthase n=1 Tax=Alishewanella agri BL06 RepID=I8UAX9_9ALTE rbh
04302015_34_scaffold_156_7
Alishewanella agri, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8000..10468)
DNA (2469bp) protein (823aa)
Peptidase n=1 Tax=Alishewanella agri BL06 RepID=I9DW51_9ALTE rbh
Peptidase {ECO:0000313|EMBL:EIW90415.1}; TaxID=1195246 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanella agri BL06.;"
hypothetical protein rbh
04302015_34_scaffold_156_8
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10675..11757)
DNA (1083bp) protein (361aa)
Transposase, IS605 OrfB family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VLV8_POLNA
IS605 family transposase OrfB
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
04302015_34_scaffold_156_9

Not on your lists

comp(11727..12302)
DNA (576bp) protein (192aa)
IS605 family transposase OrfB (Fragment) n=3 Tax=mine drainage metagenome RepID=T1BWH6_9ZZZZ
IS605 family transposase OrfB {ECO:0000313|EMBL:EQD77306.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
IS605 family transposase OrfB
04302015_34_scaffold_156_10
unknown

Not on your lists

comp(12309..12998)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI0003622281
04302015_34_scaffold_156_11
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12985..13548)
DNA (564bp) protein (188aa)
Transposon, resolvase n=1 Tax=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) RepID=B7J853_ACIF2
transposon resolvase
Transposon, resolvase {ECO:0000313|EMBL:ACK80889.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidit
04302015_34_scaffold_156_12
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13601..14809)
DNA (1209bp) protein (403aa)
HNH endonuclease n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BVE2_NITHN rbh
HNH endonuclease rbh
HNH endonuclease {ECO:0000313|EMBL:ADE13570.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (str
04302015_34_scaffold_156_13
Alishewanella agri, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15239..15841)
DNA (603bp) protein (201aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound o
FMN-dependent NADH-azoreductase n=1 Tax=Alishewanella agri BL06 RepID=I9P6A8_9ALTE rbh
(acyl-carrier-protein) phosphodiesterase
04302015_34_scaffold_156_14
Alishewanella agri, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16025..16684
DNA (660bp) protein (220aa)
RNA polymerase sigma factor n=1 Tax=Alishewanella agri BL06 RepID=I8UEI7_9ALTE rbh
RNA polymerase sigma factor {ECO:0000313|EMBL:EIW90413.1}; TaxID=1195246 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanel
RNA polymerase sigma factor
04302015_34_scaffold_156_15
Alishewanella agri, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16668..17342
DNA (675bp) protein (225aa)
Transcriptional activator n=1 Tax=Alishewanella agri BL06 RepID=I9P5V9_9ALTE rbh
Transcriptional activator {ECO:0000313|EMBL:EIW90412.1}; TaxID=1195246 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanella
transcriptional activator; K07167 putative transcriptional regulator
04302015_34_scaffold_156_16
Alishewanella agri, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17405..19645)
DNA (2241bp) protein (747aa)
Metallo-beta-lactamase n=1 Tax=Alishewanella agri BL06 RepID=I8UAX5_9ALTE rbh
Metallo-beta-lactamase {ECO:0000313|EMBL:EIW90411.1}; TaxID=1195246 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanella ag
metallo-beta-lactamase rbh
04302015_34_scaffold_156_17
Alishewanella agri, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19780..20496)
DNA (717bp) protein (239aa)
Fatty acid metabolism regulator protein n=1 Tax=Alishewanella agri BL06 RepID=I9DW46_9ALTE rbh
Fatty acid metabolism regulator protein {ECO:0000256|HAMAP-Rule:MF_00696, ECO:0000256|SAAS:SAAS00002480}; TaxID=1195246 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alterom
fadR; fatty acid metabolism regulator; K03603 GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
04302015_34_scaffold_156_18
Alishewanella agri, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20682..21218
DNA (537bp) protein (179aa)
Disulfide bond formation protein B n=1 Tax=Alishewanella agri BL06 RepID=I9P6A4_9ALTE rbh
Disulfide bond formation protein B {ECO:0000256|HAMAP-Rule:MF_00286}; Disulfide oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00286}; TaxID=1195246 species="Bacteria; Proteobacteria; Gammaproteobacteria;
dsbB; disulfide bond formation protein B; K03611 disulfide bond formation protein DsbB
04302015_34_scaffold_156_19
Alishewanella jeotgali, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21267..22961)
DNA (1695bp) protein (565aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Alishewanella jeotgali KCTC 22429 RepID=H3ZB32_9ALTE rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EHR42146.1}; TaxID=1129374 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;"
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein rbh
04302015_34_scaffold_156_20
Alishewanella aestuarii, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23140..23754)
DNA (615bp) protein (205aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1197174 species="Bacteria; Proteobacteria; Gammap
Peptidylprolyl isomerase (EC:5.2.1.8); K03773 FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase n=3 Tax=Alishewanella RepID=H3ZB33_9ALTE rbh
04302015_34_scaffold_156_21
Alishewanella aestuarii, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23859..24143)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Alishewanella aestuarii B11 RepID=J2IC76_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:EJI84264.1}; TaxID=1197174 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanella a
hypothetical protein
04302015_34_scaffold_156_22
Alishewanella aestuarii, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24143..25375)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Alishewanella aestuarii B11 RepID=J1PZT8_9ALTE rbh
Uncharacterized protein {ECO:0000313|EMBL:EJI84263.1}; TaxID=1197174 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanella a
hypothetical protein rbh
04302015_34_scaffold_156_23
Alishewanella jeotgali, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25449..26846
DNA (1398bp) protein (466aa)
Aldehyde dehydrogenase n=1 Tax=Alishewanella jeotgali KCTC 22429 RepID=H3ZB36_9ALTE rbh
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1129374 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanella
aldehyde dehydrogenase
04302015_34_scaffold_156_24
Alishewanella jeotgali, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26843..28024)
DNA (1182bp) protein (394aa)
Major facilitator transporter n=3 Tax=Alishewanella RepID=H3ZB37_9ALTE rbh
Major facilitator transporter {ECO:0000313|EMBL:EHR42151.1}; TaxID=1129374 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewan
major facilitator transporter; K05820 MFS transporter, PPP family, 3-phenylpropionic acid transporter rbh
04302015_34_scaffold_156_25
Alishewanella jeotgali, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28062..29177)
DNA (1116bp) protein (372aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
aroC; chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] rbh
Chorismate synthase n=1 Tax=Alishewanella jeotgali KCTC 22429 RepID=H3ZB38_9ALTE rbh
04302015_34_scaffold_156_26
Alishewanella agri, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29178..30134)
DNA (957bp) protein (319aa)
50S ribosomal protein L3 glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02125}; Short=L3 MTase {ECO:0000256|HAMAP-Rule:MF_02125};; EC=2.1.1.298 {ECO:0000256|HAMAP-Rule:MF_02125};; N5-glutamine
yfcB; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; K07320 putative adenine-specific DNA-methyltransferase [EC:2.1.1.72]
50S ribosomal protein L3 glutamine methyltransferase n=1 Tax=Alishewanella agri BL06 RepID=I8UAW7_9ALTE rbh
04302015_34_scaffold_156_27
Alishewanella agri, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30185..30769
DNA (585bp) protein (195aa)
Smr protein/MutS2 n=1 Tax=Alishewanella agri BL06 RepID=I9DW38_9ALTE rbh
Smr protein/MutS2 {ECO:0000313|EMBL:EIW90400.1}; TaxID=1195246 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanella agri BL
Smr protein/MutS2
04302015_34_scaffold_156_28
Alishewanella agri, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30766..31254)
DNA (489bp) protein (163aa)
sixA; phosphohistidine phosphatase SixA (EC:3.1.3.-); K08296 phosphohistidine phosphatase [EC:3.1.3.-]
Phosphohistidine phosphatase SixA n=1 Tax=Alishewanella agri BL06 RepID=I9P694_9ALTE rbh
Phosphohistidine phosphatase SixA {ECO:0000313|EMBL:EIW90399.1}; TaxID=1195246 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alish
04302015_34_scaffold_156_29
Alishewanella agri, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31411..32364
DNA (954bp) protein (318aa)
zinc metallopeptidase (EC:3.4.24.-); K01417 [EC:3.4.24.-]
Peptidase n=1 Tax=Alishewanella agri BL06 RepID=I8UEH4_9ALTE
Peptidase {ECO:0000313|EMBL:EIW90398.1}; TaxID=1195246 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanella agri BL06.;"
Displaying 29 items

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