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04302015_34_scaffold_517

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_34_scaffold_517_1
Alishewanella aestuarii, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..538
DNA (537bp) protein (179aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1197174 species="Bacteria; Proteobacteria; Gammaproteobacteria;
carB; carbamoyl phosphate synthase large subunit (EC:6.3.5.5); K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
Carbamoyl-phosphate synthase large chain n=1 Tax=Alishewanella aestuarii B11 RepID=J1YAQ8_9ALTE
04302015_34_scaffold_517_2
Alishewanella agri, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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535..1011
DNA (477bp) protein (159aa)
Transcription elongation factor GreA n=2 Tax=Alishewanella RepID=I8U797_9ALTE
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1195246 species="Bacteri
transcription elongation factor GreA; K03624 transcription elongation factor GreA
04302015_34_scaffold_517_3
Alishewanella agri, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1059..1409)
DNA (351bp) protein (117aa)
Alpha/beta hydrolase n=1 Tax=Alishewanella agri BL06 RepID=I9DPD9_9ALTE
Alpha/beta hydrolase {ECO:0000313|EMBL:EIW87865.1}; TaxID=1195246 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanella agri
alpha/beta hydrolase fold protein
04302015_34_scaffold_517_4
Rheinheimera nanhaiensis, Rheinheimera, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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1711..4179
DNA (2469bp) protein (823aa)
CRISPR-associated helicase Cas3 domain-containing protein n=1 Tax=Rheinheimera nanhaiensis E407-8 RepID=I1E2P6_9GAMM rbh
CRISPR-associated helicase Cas3 domain-containing protein {ECO:0000313|EMBL:GAB60574.1}; TaxID=562729 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Rheinheimera.
cas; CRISPR-associated helicase Cas3 domain-containing protein; K07012 rbh
04302015_34_scaffold_517_5
Rheinheimera nanhaiensis, Rheinheimera, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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4197..4916
DNA (720bp) protein (240aa)
CRISPR-associated protein Cas5 n=1 Tax=Rheinheimera nanhaiensis E407-8 RepID=I1E2P5_9GAMM rbh
CRISPR-associated protein Cas5 {ECO:0000313|EMBL:GAB60573.1}; TaxID=562729 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Rheinheimera.;" source="Rheinheimera nan
CRISPR-associated protein Cas5 rbh
04302015_34_scaffold_517_6
Rheinheimera nanhaiensis, Rheinheimera, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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4913..6859
DNA (1947bp) protein (649aa)
CRISPR-associated protein n=1 Tax=Rheinheimera nanhaiensis E407-8 RepID=I1E2P4_9GAMM rbh
CRISPR-associated protein {ECO:0000313|EMBL:GAB60572.1}; TaxID=562729 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Rheinheimera.;" source="Rheinheimera nanhaien
csd; CRISPR-associated protein, Csd1 family rbh
04302015_34_scaffold_517_7
Rheinheimera nanhaiensis, Rheinheimera, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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6870..7700
DNA (831bp) protein (277aa)
CRISPR-associated protein n=1 Tax=Rheinheimera nanhaiensis E407-8 RepID=I1E2P3_9GAMM rbh
CRISPR-associated protein {ECO:0000313|EMBL:GAB60571.1}; TaxID=562729 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Rheinheimera.;" source="Rheinheimera nanhaien
csd2; CRISPR-associated protein rbh
04302015_34_scaffold_517_8

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7786..7983
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2HII7_9GAMM
Marine sediment metagenome DNA, contig: S03H2_L07630 {ECO:0000313|EMBL:GAH43947.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
04302015_34_scaffold_517_9
CG_Syntroph_02, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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7983..8276
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI0002D8ABEE
Plasmid stabilization system protein
Tax=CG_Syntroph_02
04302015_34_scaffold_517_10
Rheinheimera nanhaiensis, Rheinheimera, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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8280..8921
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Rheinheimera nanhaiensis E407-8 RepID=I1E2P2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:GAB60570.1}; TaxID=562729 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Rheinheimera.;" source="Rheinheimera nanhaiensi
CRISPR-associated protein Cas4
04302015_34_scaffold_517_11
Rheinheimera nanhaiensis, Rheinheimera, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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8902..9918
DNA (1017bp) protein (339aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=562729 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales;
CRISPR-associated endonuclease Cas1 n=1 Tax=Rheinheimera nanhaiensis E407-8 RepID=I1E2P1_9GAMM rbh
hypothetical protein; K15342 CRISP-associated protein Cas1
04302015_34_scaffold_517_12
Rheinheimera nanhaiensis, Rheinheimera, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9932..10225
DNA (294bp) protein (98aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=562729 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatia
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Rheinheimera nanhaiensis E407-8 RepID=I1E2P0_9GAMM
CRISPR-associated protein Cas2
04302015_34_scaffold_517_13
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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14115..14261
DNA (147bp) protein (49aa)
Uncharacterized protein {ECO:0000313|EMBL:CCG39881.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirill
cytoplasmic protein
04302015_34_scaffold_517_14
Selenomonas sputigena, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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14320..14847
DNA (528bp) protein (176aa)
Putative uncharacterized protein id=3591432 bin=GWB1_Spirochaetes_59_5 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Copper binding octapeptide repeat protein {ECO:0000313|EMBL:EEX75951.1}; TaxID=546271 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas
cytoplasmic protein
04302015_34_scaffold_517_trna_1
unknown

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comp(17586..17656)
DNA (71bp)
transferRNA
04302015_34_scaffold_517_15
Alishewanella jeotgali, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17935..18438)
DNA (504bp) protein (168aa)
Zn-dependent protease n=1 Tax=Alishewanella jeotgali KCTC 22429 RepID=H3ZC64_9ALTE
Zn-dependent protease {ECO:0000313|EMBL:EHR41909.1}; TaxID=1129374 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanella jeo
gamma-glutamyl phosphate reductase GPR
Displaying 16 items

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