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04302015_34_scaffold_3590

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_34_scaffold_3590_trna_1
unknown

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comp(21..93)
DNA (73bp)
transferRNA
04302015_34_scaffold_3590_1
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(118..540)
DNA (423bp) protein (141aa)
Stringent starvation protein B n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47HW2_DECAR
ClpXP protease specificity-enhancing factor; K03600 stringent starvation protein B
Stringent starvation protein B {ECO:0000313|EMBL:AAZ45569.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas
04302015_34_scaffold_3590_2
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

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comp(544..1143)
DNA (600bp) protein (200aa)
RegF n=1 Tax=Leeia oryzae RepID=UPI000360AD28 rbh
glutathione S-transferase-like protein
Tax=CG_Beta_01
04302015_34_scaffold_3590_3

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comp(1171..1902)
DNA (732bp) protein (244aa)
Ubiquinol-cytochrome c reductase, cytochrome c1 n=1 Tax=mine drainage metagenome RepID=T1BPM7_9ZZZZ
Ubiquinol-cytochrome c reductase, cytochrome c1 {ECO:0000313|EMBL:EQD71807.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
cytochrome c1; K00413 ubiquinol-cytochrome c reductase cytochrome c1 subunit
04302015_34_scaffold_3590_4
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1920..3137)
DNA (1218bp) protein (406aa)
Cytochrome b n=2 Tax=Methylovorus RepID=C6X8R2_METSD
cytochrome b/b6 protein; K00412 ubiquinol-cytochrome c reductase cytochrome b subunit
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus
04302015_34_scaffold_3590_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3140..3742)
DNA (603bp) protein (201aa)
ubiquinol-cytochrome c reductase, iron-sulfur subunit (EC:1.10.2.2); K00411 ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:1.10.2.2] id=12497865 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
ubiquinol-cytochrome c reductase, iron-sulfur subunit (EC:1.10.2.2); K00411 ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:1.10.2.2]
Tax=GWE1_Thiobacillus_62_9_curated
04302015_34_scaffold_3590_6
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3891..5057
DNA (1167bp) protein (389aa)
HtrA2 peptidase (EC:3.4.21.108)
Periplasmic serine protease, Do/DeqQ family n=1 Tax=Herbaspirillum sp. CF444 RepID=J2UBP4_9BURK rbh
Tax=CG_Beta_01
04302015_34_scaffold_3590_7

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comp(5023..5400)
DNA (378bp) protein (126aa)
Sec-independent protein translocase, TatC subunit n=1 Tax=mine drainage metagenome RepID=T1ASV8_9ZZZZ
Sec-independent protein translocase, TatC subunit {ECO:0000313|EMBL:EQD43834.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;
Sec-independent protein translocase, TatC subunit; K03118 sec-independent protein translocase protein TatC
Displaying 8 items

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