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04302015_34_scaffold_1623

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_34_scaffold_1623_trna_1
unknown

Not on your lists

comp(115..188)
DNA (74bp)
transferRNA
04302015_34_scaffold_1623_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(224..2110)
DNA (1887bp) protein (629aa)
bifunctional isocitrate dehydrogenase kinase/phosphatase protein; K00906 isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
Isocitrate dehydrogenase kinase/phosphatase n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z1Y2_9NEIS rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
04302015_34_scaffold_1623_2
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2114..3364
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI0003782E2F
arabinose efflux permease family protein
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
04302015_34_scaffold_1623_3
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3315..4838)
DNA (1524bp) protein (508aa)
Sensory box histidine kinase/response regulator id=3735140 bin=GWF2_Bacteroidetes_33_38 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
multi-sensor hybrid histidine kinase
Tax=GWF2_Bacteroidetes_33_38_curated
04302015_34_scaffold_1623_4
unknown

Not on your lists

comp(4843..5160)
DNA (318bp) protein (106aa)

This feature has no annotations

04302015_34_scaffold_1623_5
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5172..5846)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C3G4_NITHN
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
04302015_34_scaffold_1623_6
Alishewanella aestuarii, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5854..6507)
DNA (654bp) protein (218aa)
maleylacetoacetate isomerase; K01800 maleylacetoacetate isomerase [EC:5.2.1.2]
Maleylacetoacetate isomerase n=1 Tax=Alishewanella aestuarii B11 RepID=J1Q4D5_9ALTE
Maleylacetoacetate isomerase {ECO:0000313|EMBL:EJI85978.1}; TaxID=1197174 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewane
04302015_34_scaffold_1623_7

Not on your lists

6593..7051
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QWF9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI11582.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
04302015_34_scaffold_1623_8
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7060..7449
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D213_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL06846.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium ja
04302015_34_scaffold_1623_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7458..8381)
DNA (924bp) protein (308aa)
protease; K04773 protease IV [EC:3.4.21.-]
peptidase S49 n=1 Tax=Thiobacillus thioparus RepID=UPI00037D5B5B rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_34_scaffold_1623_10
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8387..9133)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00035EAF45
hypothetical protein
Tax=GWA2_Rhodocyclales_65_20_curated
04302015_34_scaffold_1623_11
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9147..9614)
DNA (468bp) protein (156aa)
TspO and MBR like protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B9A2_9RHIZ
TspO and MBR like protein
TspO and MBR like protein {ECO:0000313|EMBL:AGK57101.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium d
04302015_34_scaffold_1623_12
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9666..10217
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P7L3_AROAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI06698.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (
04302015_34_scaffold_1623_13
Azoarcus communis, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10306..10944)
DNA (639bp) protein (213aa)
Putative SAM-dependent methyltransferase (Fragment) n=1 Tax=Azoarcus communis RepID=Q1KY49_9RHOO
Putative SAM-dependent methyltransferase {ECO:0000313|EMBL:ABE73735.1}; Flags: Fragment;; TaxID=41977 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;"
SAM-dependent methyltransferase
04302015_34_scaffold_1623_14
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10941..11063)
DNA (123bp) protein (41aa)
Putative uncharacterized protein n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1W238_9BURK
cyd operon protein
Tax=GWF1_Xanthomonadales_69_6_curated
04302015_34_scaffold_1623_15
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11093..12229)
DNA (1137bp) protein (379aa)
cytochrome d terminal oxidase polypeptide subunit II (EC:1.10.3.-); K00426 cytochrome d ubiquinol oxidase subunit II [EC:1.10.3.-] rbh
Cytochrome bd type terminal oxidase subunit II n=1 Tax=Thauera sp. 28 RepID=N6ZRE4_9RHOO rbh
Cytochrome d ubiquinol oxidase subunit II {ECO:0000313|EMBL:BAP89995.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E1
04302015_34_scaffold_1623_16
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12244..13812)
DNA (1569bp) protein (523aa)
cytochrome BD oxidase subunit I n=1 Tax=Singularimonas variicoloris RepID=UPI0003686A59 rbh
cytochrome d ubiquinol oxidase subunit 1 rbh
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
04302015_34_scaffold_1623_17
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13802..13999)
DNA (198bp) protein (66aa)
DNA polymerase I {ECO:0000313|EMBL:BAP89993.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
04302015_34_scaffold_1623_18
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14003..15610)
DNA (1608bp) protein (536aa)
Sulfide-quinone oxidoreductase {ECO:0000313|EMBL:ABM38133.1}; EC=1.8.5.- {ECO:0000313|EMBL:ABM38133.1};; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonada
Sulfide-quinone oxidoreductase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VR55_POLNA rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
04302015_34_scaffold_1623_19
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15624..16994)
DNA (1371bp) protein (457aa)
Type I secretion outer membrane protein, TolC family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VR54_POLNA rbh
Type I secretion outer membrane protein, TolC family {ECO:0000313|EMBL:BAP89991.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bact
TolC family type I secretion outer membrane protein; K12340 outer membrane channel protein
04302015_34_scaffold_1623_20
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16994..17206)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. PBA RepID=I9BYM6_9RALS
Uncharacterized protein {ECO:0000313|EMBL:BAP89989.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
hypothetical protein
04302015_34_scaffold_1623_21
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17203..20430)
DNA (3228bp) protein (1076aa)
Putative multidrug resistance protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XKE8_VARPD rbh
Putative multidrug resistance protein {ECO:0000313|EMBL:AGU53058.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo
putative multidrug resistance protein
04302015_34_scaffold_1623_22
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20441..21454)
DNA (1014bp) protein (338aa)
RND transporter n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036E17AB
Membrane-fusion protein {ECO:0000313|EMBL:GAD20460.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
efflux transporter, RND family
Displaying 23 items

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