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04302015_34_scaffold_807

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Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_34_scaffold_807_1
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..342)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI00035C1645
era; GTP-binding protein Era; K03595 GTP-binding protein Era
Tax=BJP_S1_SUB10_Methylophilales_55_32
04302015_34_scaffold_807_2
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(335..1030)
DNA (696bp) protein (232aa)
ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3]
Ribonuclease 3 n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SFC3_GALCS
Tax=GWA2_Gallionellales_54_124_curated
04302015_34_scaffold_807_3

Not on your lists

comp(1034..2005)
DNA (972bp) protein (324aa)
Signal peptidase I {ECO:0000313|EMBL:EQD70202.1}; EC=3.4.21.- {ECO:0000313|EMBL:EQD70202.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage
signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=mine drainage metagenome RepID=T1BK88_9ZZZZ rbh
04302015_34_scaffold_807_4

Not on your lists

comp(2005..2505)
DNA (501bp) protein (167aa)
GTP-binding protein LepA (Fragment) n=1 Tax=mine drainage metagenome RepID=T1BNM9_9ZZZZ
GTP-binding protein LepA {ECO:0000313|EMBL:EQD70203.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
GTP-binding protein LepA; K03596 GTP-binding protein LepA
04302015_34_scaffold_807_5
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2481..3833)
DNA (1353bp) protein (451aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
Elongation factor 4 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIH0_9PROT
GTP-binding protein LepA; K03596 GTP-binding protein LepA
04302015_34_scaffold_807_6
unknown

Not on your lists

comp(3918..4100)
DNA (183bp) protein (61aa)

This feature has no annotations

04302015_34_scaffold_807_7
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4144..5571)
DNA (1428bp) protein (476aa)
Putative periplasmic serine endoprotease DegP-like {ECO:0000313|EMBL:EXI75122.1}; EC=3.4.21.107 {ECO:0000313|EMBL:EXI75122.1};; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Can
peptidase n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00035DFEEC
04302015_34_scaffold_807_8
unknown

Not on your lists

comp(5568..5924)
DNA (357bp) protein (119aa)

This feature has no annotations

04302015_34_scaffold_807_9
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5899..6621)
DNA (723bp) protein (241aa)
Sigma-E factor regulatory (Negative regulator) transcription regulator protein n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CU40_9BURK
Sigma-E factor regulatory (Negative regulator) transcription regulator protein {ECO:0000313|EMBL:EIJ47133.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxal
algN; sigma factor algU regulatory protein mucB; K03598 sigma-E factor negative regulatory protein RseB
04302015_34_scaffold_807_10

Not on your lists

comp(6618..7136)
DNA (519bp) protein (173aa)
Anti sigma-E protein RseA n=1 Tax=mine drainage metagenome RepID=T0XXX2_9ZZZZ
Anti sigma-E protein RseA {ECO:0000313|EMBL:EQD27591.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
anti sigma-E protein, RseA
04302015_34_scaffold_807_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7136..7882)
DNA (747bp) protein (249aa)
RNA polymerase sigma factor n=1 Tax=Azoarcus sp. KH32C RepID=H0PU28_9RHOO rbh
rpoE; ECF subfamily RNA polymerase, sigma-24 subunit
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
04302015_34_scaffold_807_12
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7945..9372
DNA (1428bp) protein (476aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47DG6_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ47115.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromati
04302015_34_scaffold_807_13
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9430..11067
DNA (1638bp) protein (546aa)
Electron transfer flavoprotein-ubiquinone oxidoreductase {ECO:0000313|EMBL:CDH44455.1}; EC=1.5.5.1 {ECO:0000313|EMBL:CDH44455.1};; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria;
electron-transferring-flavoprotein dehydrogenase (EC:1.5.5.1); K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
Flavin-dependent dehydrogenase n=1 Tax=SAR116 cluster alpha proteobacterium HIMB100 RepID=G6A0Z3_9PROT
04302015_34_scaffold_807_14
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11068..11700)
DNA (633bp) protein (211aa)
Methenyltetrahydrofolate cyclohydrolase {ECO:0000313|EMBL:EWS61017.1}; EC=3.5.4.9 {ECO:0000313|EMBL:EWS61017.1};; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
formimidoyltetrahydrofolate cyclodeaminase (EC:4.3.1.4)
Formimidoyltetrahydrofolate cyclodeaminase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SKX2_METPP
04302015_34_scaffold_807_15
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11705..12568)
DNA (864bp) protein (288aa)
Bifunctional protein MdtA {ECO:0000313|EMBL:ESS71979.1}; EC=1.5.1.- {ECO:0000313|EMBL:ESS71979.1};; EC=1.5.1.5 {ECO:0000313|EMBL:ESS71979.1};; TaxID=1116472 species="Bacteria; Proteobacteria; Gammapro
methylenetetrahydromethanopterin dehydrogenase/methylenetetrahydrofolate dehydrogenase (EC:1.5.1.5)
Bifunctional protein MdtA n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5BVS6_9GAMM rbh
04302015_34_scaffold_807_16
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12663..14471)
DNA (1809bp) protein (603aa)
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:CDI04173.1}; EC=1.3.8.- {ECO:0000313|EMBL:CDI04173.1};; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Cand
acyl-CoA dehydrogenase n=1 Tax=Leucothrix mucor RepID=UPI0003B4B8E1 rbh
acyl-CoA dehydrogenase
04302015_34_scaffold_807_17
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14483..15220)
DNA (738bp) protein (246aa)
pseudouridine synthase Rsu; K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
Pseudouridine synthase Rsu n=1 Tax=Nitrosomonas sp. AL212 RepID=F9ZK62_9PROT
Tax=BJP_IG2103_Dechloromonas_60_92
04302015_34_scaffold_807_18
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15213..16055)
DNA (843bp) protein (281aa)
Putative carboxylesterase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ARC4_AZOBR
putative carboxylesterase
Putative carboxylesterase {ECO:0000313|EMBL:CCC99985.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum
04302015_34_scaffold_807_19
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16048..16641)
DNA (594bp) protein (198aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiace
5-formyltetrahydrofolate cyclo-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HBY2_9CLOT
04302015_34_scaffold_807_20
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

16684..17070
DNA (387bp) protein (129aa)
Putative translation initiation inhibitor, yjgF family n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8KV09_9SYNC
endoribonuclease L-PSP
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
04302015_34_scaffold_807_21
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17084..18982)
DNA (1899bp) protein (633aa)
Propionate--CoA ligase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AC72_9PROT rbh
Acetyl-CoA synthetase {ECO:0000313|EMBL:GAO35775.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T0
prpE; Propionate--CoA ligase
04302015_34_scaffold_807_22
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19025..20008)
DNA (984bp) protein (328aa)
YhdH/YhfP family quinone oxidoreductase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B3W0_9PROT rbh
Quinone oxidoreductase {ECO:0000313|EMBL:GAO35774.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T
YhdH/YhfP family quinone oxidoreductase rbh
04302015_34_scaffold_807_23
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20024..21133)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QL15_BORBO
hypothetical protein
ATPase, AFG1 family {ECO:0000313|EMBL:KCV61180.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica
04302015_34_scaffold_807_24
Chromobacterium violaceum, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21136..22563)
DNA (1428bp) protein (476aa)
lpdA2; dihydrolipoamide dehydrogenase (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4]
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=243365 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacter
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI00036DBF03 rbh
04302015_34_scaffold_807_25
Burkholderia sp. MR1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22566..23009)
DNA (444bp) protein (148aa)
dihydrolipoamide acetyltransferase; K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxI
dihydrolipoamide succinyltransferase n=1 Tax=Pusillimonas noertemannii RepID=UPI0002EA939F
04302015_34_scaffold_807_26
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22981..23751)
DNA (771bp) protein (257aa)
sucB; dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC:2.3.1.61); K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxI
2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase n=1 Tax=Herbaspirillum sp. YR522 RepID=J2VIG1_9BURK
04302015_34_scaffold_807_27
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23769..26582)
DNA (2814bp) protein (938aa)
sucA; 2-oxoglutarate dehydrogenase E1 (EC:1.2.4.2)
2-oxoglutarate dehydrogenase E1 component n=1 Tax=Nitrosospira sp. APG3 RepID=M5DT05_9PROT rbh
Tax=RBG_16_Betaproteobacteria_66_20_curated
04302015_34_scaffold_807_28
R_Methylophilales_57_10, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26622..27917)
DNA (1296bp) protein (432aa)
gltA; citrate synthase I (EC:2.3.3.1) rbh
type II citrate synthase n=1 Tax=Leeia oryzae RepID=UPI00037C521A rbh
Tax=RIFCSPHIGHO2_02_FULL_Methylophilales_57_10_curated
04302015_34_scaffold_807_29
Herbaspirillum seropedicae, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27954..28199)
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00035E4A30
hypothetical protein; K09159 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ64459.1}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum s
04302015_34_scaffold_807_30
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28201..28896)
DNA (696bp) protein (232aa)
succinate dehydrogenase and fumarate reductase iron-sulfur protein (EC:1.3.5.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1]
Succinate dehydrogenase iron-sulfur subunit n=1 Tax=mine drainage metagenome RepID=T1DG72_9ZZZZ rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Displaying items 1-30 of 34 in total

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