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04302015_34_scaffold_1025

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_34_scaffold_1025_1
Cardiobacterium valvarum, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..143)
DNA (141bp) protein (47aa)
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=797473 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" s
04302015_34_scaffold_1025_2
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(157..2037)
DNA (1881bp) protein (627aa)
Protein translocase subunit SecD n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D808_9GAMM rbh
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" sour
protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD
04302015_34_scaffold_1025_3
gamma proteobacterium HTCC5015, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2116..2448)
DNA (333bp) protein (111aa)
Preprotein translocase, YajC subunit n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JY31_9GAMM
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EDY85481.1}; TaxID=391615 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HTCC5015.;"
preprotein translocase subunit YajC; K03210 preprotein translocase subunit YajC
04302015_34_scaffold_1025_4
Photobacterium aphoticum, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2497..3615)
DNA (1119bp) protein (373aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym
tgt; queuine tRNA-ribosyltransferase; K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29]
Queuine tRNA-ribosyltransferase n=1 Tax=Photobacterium leiognathi subsp. mandapamensis svers.1.1. RepID=F2PA70_PHOMO
04302015_34_scaffold_1025_5
unknown

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comp(3633..4226)
DNA (594bp) protein (198aa)

This feature has no annotations

04302015_34_scaffold_1025_6
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4226..5272)
DNA (1047bp) protein (349aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-]
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
S-adenosylmethionine tRNA ribosyltransferase n=1 Tax=Pseudomonas mendocina RepID=UPI0003821592
04302015_34_scaffold_1025_7
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5297..5710)
DNA (414bp) protein (138aa)
Ferric uptake regulator, Fur family n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31FS3_THICR
ferric uptake regulator family protein; K03711 Fur family transcriptional regulator, ferric uptake regulator
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:ABB42000.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Th
04302015_34_scaffold_1025_8
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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5817..6134
DNA (318bp) protein (106aa)
SmpA/OmlA n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31FS2_THICR
SmpA/OmlA; K06186 small protein A
Tax=CG_Thiomicrospira_01
04302015_34_scaffold_1025_9
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6355..6642)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BII7_9GAMM
UPF0125 protein EBS_1067 {ECO:0000256|HAMAP-Rule:MF_00460}; TaxID=1248727 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="endosymbiont of unidentified scaly snail isolate Monju.;"
hypothetical protein; K09801 hypothetical protein
04302015_34_scaffold_1025_10
Endozoicomonas numazuensis, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6632..7066)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=gamma proteobacterium HIMB30 RepID=UPI000262CE02
Uncharacterized protein {ECO:0000313|EMBL:KEQ16922.1}; TaxID=1137799 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="Endozoicomonas nu
oligoketide cyclase/lipid transport protein
04302015_34_scaffold_1025_11
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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7108..7593
DNA (486bp) protein (162aa)
SsrA-binding protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3J2D9_9GAMM
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloba
smpB; SsrA-binding protein; K03664 SsrA-binding protein
04302015_34_scaffold_1025_trna_1
unknown

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7644..7717
DNA (74bp)
transferRNA
04302015_34_scaffold_1025_trna_2
unknown

Not on your lists

7743..7816
DNA (74bp)
transferRNA
04302015_34_scaffold_1025_trna_3
unknown

Not on your lists

7850..7922
DNA (73bp)
transferRNA
Displaying 14 items

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