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04302015_35_scaffold_129

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Displaying items 1-30 of 43 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_35_scaffold_129_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1..546)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037A2ADF
putative aminopeptidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_129_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(561..1292)
DNA (732bp) protein (244aa)
transcriptional regulator n=1 Tax=Segetibacter koreensis RepID=UPI000379C942 rbh
LytTR family two component transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_129_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1316..2374)
DNA (1059bp) protein (353aa)
Putative signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL88_NIAKG rbh
putative signal transduction histidine kinase rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_129_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

2530..4464
DNA (1935bp) protein (645aa)
1-deoxy-D-xylulose-5-phosphate synthase; K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] rbh
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Segetibacter koreensis RepID=UPI000367F011 rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_129_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(4514..5329)
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037673B7 rbh
condensin subunit ScpA; K05896 segregation and condensation protein A rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_129_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5407..5850)
DNA (444bp) protein (148aa)
Large-conductance mechanosensitive channel n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S599_9FLAO
Large-conductance mechanosensitive channel; K03282 large conductance mechanosensitive channel
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_129_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5879..6625)
DNA (747bp) protein (249aa)
Polyphosphate:AMP phosphotransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL94_NIAKG rbh
Polyphosphate:AMP phosphotransferase rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_129_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6777..7559
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL95_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_129_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(7560..8123)
DNA (564bp) protein (188aa)
Ribosome-recycling factor n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PER6_CHIPD
ribosome recycling factor; K02838 ribosome recycling factor
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_129_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8215..9057
DNA (843bp) protein (281aa)
transketolase; K00615 transketolase [EC:2.2.1.1] rbh
transketolase n=1 Tax=Niabella aurantiaca RepID=UPI000365132C rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_129_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(9086..10291)
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036576D3
hypothetical protein; K09808 lipoprotein-releasing system permease protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_129_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(10288..10647)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003700443
Ribosome-binding factor A; K02834 ribosome-binding factor A
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_129_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10661..12538
DNA (1878bp) protein (626aa)
xenobiotic-transporting ATPase; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000365BE23 rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_129_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(12588..13622)
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035EBB85
TraR/DksA family transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_129_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


comp(13628..16999)
DNA (3372bp) protein (1124aa)
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5]
isoleucyl-tRNA synthase n=1 Tax=Segetibacter koreensis RepID=UPI000367F9DC
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_129_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

17112..18104
DNA (993bp) protein (331aa)
D-isomer specific 2-hydroxyacid dehydrogenase; K03778 D-lactate dehydrogenase [EC:1.1.1.28]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036DAC2B
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_129_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

18161..19204
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036DAD90
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_129_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(19212..20135)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000374C538
AraC family transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_129_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

20289..22268
DNA (1980bp) protein (660aa)
DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3] rbh
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000373A419
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_129_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

22336..22542
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000373AD3D
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_129_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(22571..25993)
DNA (3423bp) protein (1141aa)
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] rbh
transcription-repair coupling factor n=1 Tax=Segetibacter koreensis RepID=UPI00037008A6 rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_129_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(26035..26499)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NA92_9BACT
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_129_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

26582..30391
DNA (3810bp) protein (1270aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y0A6_9SPHI rbh
subtilisin-like serine protease rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_129_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

30479..31225
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000370C800
ferredoxin--NAD(+) reductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_129_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


comp(31246..32712)
DNA (1467bp) protein (489aa)
glycyl-tRNA synthetase; K01880 glycyl-tRNA synthetase [EC:6.1.1.14] rbh
glycyl-tRNA synthetease n=1 Tax=Segetibacter koreensis RepID=UPI0003661282 rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_129_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

32809..34215
DNA (1407bp) protein (469aa)
pepP; Xaa-Pro aminopeptidase (EC:3.4.11.9); K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] rbh
Secreted Xaa-Pro aminopeptidase n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0LZN0_GRAFK rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_129_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(34227..34550)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Mariniradius saccharolyticus AK6 RepID=M7X576_9BACT
pyrophosphatase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_129_28
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(34550..35002)
DNA (453bp) protein (151aa)
dtd; D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-); K07560 D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-]
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=DTD_FLAPJ
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_129_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

35065..35775
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBZ4_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_129_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

35775..36848
DNA (1074bp) protein (358aa)
cytochrome-c peroxidase; K00428 cytochrome c peroxidase [EC:1.11.1.5] rbh
Cytochrome-c peroxidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBZ3_NIAKG rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 43 in total

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