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04302015_35_scaffold_482

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_35_scaffold_482_1
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

143..385
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BXE7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ERM80587.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
Hexameric tyrosine-coordinated heme protein (HTHP)
04302015_35_scaffold_482_2
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

394..786
DNA (393bp) protein (131aa)
Globin family protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RVD1_LEAB4
globin family protein; K06886 hemoglobin
Globin family protein {ECO:0000313|EMBL:ADQ16117.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
04302015_35_scaffold_482_3
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

783..2129
DNA (1347bp) protein (449aa)
tryptophan 23-dioxygenase; K00453 tryptophan 2,3-dioxygenase [EC:1.13.11.11] rbh
Tryptophan 23-dioxygenase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9I2_FLUTR rbh
Tryptophan 23-dioxygenase {ECO:0000313|EMBL:AEA45163.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
04302015_35_scaffold_482_4
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2151..2879
DNA (729bp) protein (243aa)
Iron-sulfur cluster repair di-iron protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RVD3_LEAB4 rbh
iron-sulfur cluster repair di-iron protein; K07322 regulator of cell morphogenesis and NO signaling rbh
Iron-sulfur cluster repair di-iron protein {ECO:0000313|EMBL:ADQ16119.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
04302015_35_scaffold_482_5
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2872..3330
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9I4_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA45165.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
04302015_35_scaffold_482_6
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3327..3653
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037B8C9D
ferredoxin
Tax=GWA2_Bacteroidetes_30_7_curated
04302015_35_scaffold_482_7
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3865..4248
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI0003688DE9
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase {ECO:0000313|EMBL:KGO87186.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
hypothetical protein
04302015_35_scaffold_482_8
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4264..4554
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI00037E3AAF
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KGO87185.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
04302015_35_scaffold_482_9
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4515..4859
DNA (345bp) protein (115aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SEG2_9FLAO
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KGO97013.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
sigma-70 family RNA polymerase sigma factor
04302015_35_scaffold_482_10
CG_Flavo_01, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4873..5106
DNA (234bp) protein (78aa)
Thioredoxin n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PIQ3_MURRD
thioredoxin
Tax=CG_Flavo_01
04302015_35_scaffold_482_11
CG_Flavo_01, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5187..5924
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PIQ2_MURRD rbh
hypothetical protein rbh
Tax=CG_Flavo_01
04302015_35_scaffold_482_12
Muricauda ruestringensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6002..6385
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PIQ1_MURRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM71796.1}; TaxID=886377 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1).;"
04302015_35_scaffold_482_13
Muricauda ruestringensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6386..6991
DNA (606bp) protein (202aa)
Regulatory protein MarR n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PIP9_MURRD rbh
regulatory protein MarR rbh
Regulatory protein MarR {ECO:0000313|EMBL:AEM71794.1}; TaxID=886377 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1).;"
04302015_35_scaffold_482_14
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6988..7704
DNA (717bp) protein (239aa)
Alanine racemase domain protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RSW9_LEAB4 rbh
alanine racemase; K06997 rbh
Alanine racemase domain protein {ECO:0000313|EMBL:ADQ16808.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
04302015_35_scaffold_482_15
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8170..8481)
DNA (312bp) protein (104aa)
hypothetical protein n=2 Tax=Flexithrix dorotheae RepID=UPI00035EDA59
DNA replication protein
DNA replication protein {ECO:0000313|EMBL:AFL85109.1}; Flags: Precursor;; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
04302015_35_scaffold_482_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8524..8775)
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035FF8F1
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_482_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8814..9689)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003609E29
cell division protein FtsX; K09811 cell division transport system permease protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_482_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9867..10766
DNA (900bp) protein (300aa)
leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
Leucine--tRNA ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP43_NIAKG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_482_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10760..12601
DNA (1842bp) protein (614aa)
leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
Leucine--tRNA ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP43_NIAKG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_482_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

12588..13724
DNA (1137bp) protein (379aa)
Outer membrane protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EB16_RUNSL
outer membrane protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_482_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

13848..15944
DNA (2097bp) protein (699aa)
Peptidase S9B dipeptidylpeptidase IV domain protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EQ67_EMTOG rbh
peptidase S9B dipeptidylpeptidase IV domain protein rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_482_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15983..17032
DNA (1050bp) protein (350aa)
Peptidase S41 n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ERY4_EMTOG
peptidase S41
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_482_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

17111..19150
DNA (2040bp) protein (680aa)
Peptidase S41 n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ERY4_EMTOG rbh
peptidase S41 rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_482_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

19166..19873
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036E511E
peptidase M23
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_482_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(19866..20537)
DNA (672bp) protein (224aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X049_9PORP
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_482_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

20593..21624
DNA (1032bp) protein (344aa)
Holliday junction DNA helicase subunit RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12]
Holliday junction DNA helicase RuvB n=1 Tax=Segetibacter koreensis RepID=UPI00037F18AD
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_482_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(21621..22319)
DNA (699bp) protein (233aa)
transcriptional regulator n=1 Tax=Segetibacter koreensis RepID=UPI00037F3BB6
two component transcriptional regulator, winged helix family
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_482_28
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(22397..23329)
DNA (933bp) protein (311aa)
cytochrome-c peroxidase (EC:1.11.1.5); K00428 cytochrome c peroxidase [EC:1.11.1.5]
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00035C210B
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_482_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

23381..24955
DNA (1575bp) protein (525aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000361D544
hypothetical protein; K06915
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_35_scaffold_482_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(24949..26862)
DNA (1914bp) protein (638aa)
RecQ familyATP-dependent DNA helicase; K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12]
ATP-dependent DNA helicase, RecQ family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP55_NIAKG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 31 in total

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