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04302015_35_scaffold_80

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Displaying items 1-30 of 153 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_35_scaffold_80_1
Snodgrassella alvi, Snodgrassella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..97
DNA (96bp) protein (32aa)
Elongation factor Tu n=1 Tax=Pantoea sp. Sc1 RepID=H8DNC2_9ENTR
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1196083 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Snodgrassella.;" source="Snodgrassella alvi.;"
translation elongation factor Tu; K02358 elongation factor Tu
04302015_35_scaffold_80_2
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


111..425
DNA (315bp) protein (105aa)
30S ribosomal protein S10 n=1 Tax=Limnohabitans RepID=UPI0002D4A550
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
04302015_35_scaffold_80_3
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


610..1275
DNA (666bp) protein (222aa)
50S ribosomal protein L3 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=RL3_RHOFD rbh
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 rbh
50S ribosomal protein L3 {ECO:0000255|HAMAP-Rule:MF_01325}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
04302015_35_scaffold_80_4
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1275..1895
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=1 Tax=Curvibacter lanceolatus RepID=UPI0003672C9D rbh
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 rbh
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
04302015_35_scaffold_80_5
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1892..2206
DNA (315bp) protein (105aa)
50S ribosomal protein L23 n=2 Tax=Acidovorax RepID=A1TJ09_ACIAC
ribosomal protein L25/L23; K02892 large subunit ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
04302015_35_scaffold_80_6
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2209..3033
DNA (825bp) protein (275aa)
50S ribosomal protein L2 n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002E9828D rbh
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 rbh
04302015_35_scaffold_80_7
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3044..3322
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=RS19_RHOFD
rpsS; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19
30S ribosomal protein S19 {ECO:0000255|HAMAP-Rule:MF_00531}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
04302015_35_scaffold_80_8
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3332..3661
DNA (330bp) protein (110aa)
50S ribosomal protein L22 n=1 Tax=Curvibacter lanceolatus RepID=UPI000377D592
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
04302015_35_scaffold_80_9
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3677..4564
DNA (888bp) protein (296aa)
30S ribosomal protein S3 n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002E15A0C rbh
rpsC; 30S ribosomal protein S3
Tax=GWA2_Curvibacter_64_110_curated
04302015_35_scaffold_80_10
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4567..4983
DNA (417bp) protein (139aa)
50S ribosomal protein L16 n=1 Tax=Curvibacter lanceolatus RepID=UPI00037E975E
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
04302015_35_scaffold_80_11
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5000..5206
DNA (207bp) protein (69aa)
50S ribosomal protein L29 n=1 Tax=Curvibacter lanceolatus RepID=UPI000373EEC0
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29
Tax=GWA2_Curvibacter_64_110_curated
04302015_35_scaffold_80_12
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5216..5485
DNA (270bp) protein (90aa)
30S ribosomal protein S17 n=1 Tax=Limnohabitans RepID=UPI000315546B
similar to ribosomal protein S17
Tax=GWA2_Curvibacter_64_110_curated
04302015_35_scaffold_80_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5578..6084
DNA (507bp) protein (169aa)
Redoxin domain protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CP43_VARPS
redoxin
Redoxin domain protein {ECO:0000313|EMBL:ACS21507.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
04302015_35_scaffold_80_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6146..6823)
DNA (678bp) protein (226aa)
Cytochrome B561 id=1278727 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
cytochrome B561
Tax=GWE1_Burkholderiales_65_30_curated
04302015_35_scaffold_80_15
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6917..7369
DNA (453bp) protein (151aa)
Cytochrome c556 n=1 Tax=Polaromonas sp. CF318 RepID=J2LKD4_9BURK
Cytochrome c556 {ECO:0000313|EMBL:EJL85713.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
class II cytochrome c
04302015_35_scaffold_80_16
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7493..8731
DNA (1239bp) protein (413aa)
Arabinose efflux permease family protein n=1 Tax=Polaromonas sp. CF318 RepID=J2TY34_9BURK
major facilitator superfamily transporter
Tax=GWA2_Curvibacter_64_110_curated
04302015_35_scaffold_80_17
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8756..9202
DNA (447bp) protein (149aa)
PTS system, enzyme IIA mannose; K02821 PTS system, ascorbate-specific IIA component [EC:2.7.1.69]
PTS system fructose subfamily IIA component n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6B8_ACIDE
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
04302015_35_scaffold_80_18
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9171..9440
DNA (270bp) protein (90aa)
phosphocarrier protein HPr n=1 Tax=Curvibacter lanceolatus RepID=UPI000369059D
PTS system, HPr; K11189 phosphocarrier protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
04302015_35_scaffold_80_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9447..11207
DNA (1761bp) protein (587aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002F2B07B
phosphoenolpyruvate-protein phosphotransferase
04302015_35_scaffold_80_20
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11204..12202)
DNA (999bp) protein (333aa)
lipoyl synthase (EC:2.8.1.8)
lipoyl synthase n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002DA580C rbh
Tax=GWA2_Curvibacter_64_110_curated
04302015_35_scaffold_80_21
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12222..12899)
DNA (678bp) protein (226aa)
lipoate-protein ligase B (EC:2.3.1.181)
Octanoyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJQ1_9BURK rbh
Tax=GWA2_Curvibacter_64_110_curated
04302015_35_scaffold_80_22
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12896..13189)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VIU2_POLNA
hypothetical protein; K09158 hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
04302015_35_scaffold_80_23
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13299..13775
DNA (477bp) protein (159aa)
Putative ATP synthase protein I n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12GQ7_POLSJ
putative ATP synthase protein I; K02116 ATP synthase protein I
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
04302015_35_scaffold_80_24
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13790..14647
DNA (858bp) protein (286aa)
F0F1 ATP synthase subunit A (EC:3.6.3.14); K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14]
ATP synthase subunit a n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12GQ6_POLSJ
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
04302015_35_scaffold_80_25
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14699..14947
DNA (249bp) protein (83aa)
F0F1 ATP synthase subunit C (EC:3.6.3.14); K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14]
ATP synthase subunit c n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=ATPL_POLSJ
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
04302015_35_scaffold_80_26
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14979..15449
DNA (471bp) protein (157aa)
F0F1 ATP synthase subunit B; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14]
ATP synthase subunit b n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=ATPF_POLSJ
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
04302015_35_scaffold_80_27
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15459..15989
DNA (531bp) protein (177aa)
F0F1 ATP synthase subunit delta; K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14]
ATP synthase subunit delta n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJP4_9BURK
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
04302015_35_scaffold_80_28
Curvibacter putative symbiont of Hydra magnipapillata, Curvibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16026..17564
DNA (1539bp) protein (513aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=667019 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter.;" source="Curvibacter putative symbiont of Hydra magnipapillata.;"
atpA; ATP synthase, subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YF86_9BURK
04302015_35_scaffold_80_29
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17591..18457
DNA (867bp) protein (289aa)
F0F1 ATP synthase subunit gamma (EC:3.6.3.15); K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14]
F0F1 ATP synthase subunit gamma n=1 Tax=Acidovorax avenae RepID=UPI0002E8398D
ATP synthase gamma chain {ECO:0000255|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000255|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000255|HAMAP-Rule:MF_00815}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
04302015_35_scaffold_80_30
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18479..19882
DNA (1404bp) protein (468aa)
F0F1 ATP synthase subunit beta (EC:3.6.3.14)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
ATP synthase subunit beta n=1 Tax=Acidovorax sp. KKS102 RepID=K0HMG2_9BURK
Displaying items 1-30 of 153 in total

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