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04302015_35_scaffold_23

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Displaying items 1-30 of 232 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_35_scaffold_23_1
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3..95)
DNA (93bp) protein (31aa)
Elongation factor Tu n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8KYI4_FRAAD
translation elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
04302015_35_scaffold_23_2
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(243..2345)
DNA (2103bp) protein (701aa)
Elongation factor G 1 n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=EFG1_POLSJ rbh
elongation factor G; K02355 elongation factor G rbh
Elongation factor G 1 {ECO:0000255|HAMAP-Rule:MF_00054}; Short=EF-G 1 {ECO:0000255|HAMAP-Rule:MF_00054};; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_35_scaffold_23_3
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2555..3028)
DNA (474bp) protein (158aa)
30S ribosomal protein S7 n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=RS7_POLNA
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7
30S ribosomal protein S7 {ECO:0000255|HAMAP-Rule:MF_00480}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
04302015_35_scaffold_23_4
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3231..3608)
DNA (378bp) protein (126aa)
30S ribosomal protein S12 n=2 Tax=Comamonadaceae RepID=J1ENN2_9BURK
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
04302015_35_scaffold_23_5
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3782..4981)
DNA (1200bp) protein (400aa)
penicillin-binding protein 6 (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
Penicillin-binding protein 6, Serine peptidase, MEROPS family S11 n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12GX7_POLSJ
Penicillin-binding protein 6, Serine peptidase, MEROPS family S11 {ECO:0000313|EMBL:ABE42215.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_35_scaffold_23_6
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5080..5700)
DNA (621bp) protein (207aa)
Putative transmembrane protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VIP3_POLNA
hypothetical protein; K07018
Putative transmembrane protein {ECO:0000313|EMBL:ABM35521.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
04302015_35_scaffold_23_7
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5819..6169)
DNA (351bp) protein (117aa)
Ferredoxin-like protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12GX9_POLSJ
ferredoxin-like protein
Ferredoxin-like protein {ECO:0000313|EMBL:ABE42213.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_35_scaffold_23_8
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6166..7350)
DNA (1185bp) protein (395aa)
Putative integral membrane protein n=1 Tax=Polaromonas sp. CF318 RepID=J2KV53_9BURK rbh
Putative integral membrane protein {ECO:0000313|EMBL:EJL76903.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
VanZ family protein rbh
04302015_35_scaffold_23_9
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7489..7917)
DNA (429bp) protein (143aa)
Putative membrane protein n=1 Tax=Polaromonas sp. CF318 RepID=J3CR86_9BURK
Putative membrane protein {ECO:0000313|EMBL:EJL76904.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein; K08973 putative membrane protein
04302015_35_scaffold_23_10
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8178..9371
DNA (1194bp) protein (398aa)
delta-aminolevulinic acid dehydratase (EC:4.2.1.24); K01698 porphobilinogen synthase [EC:4.2.1.24] rbh
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Delta-aminolevulinic acid dehydratase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12GY2_POLSJ rbh
04302015_35_scaffold_23_11
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9433..10587
DNA (1155bp) protein (385aa)
Candidate Mg2+ and Co2+ transporter n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y4R6_RAMTT rbh
corA; Mg2+ and Co2+ transporter rbh
Candidate Mg2+ and Co2+ transporter {ECO:0000313|EMBL:AEG91384.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
04302015_35_scaffold_23_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10599..11339
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VIN7_POLNA rbh
Variovorax paradoxus strain MEDvA23 contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ31741.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein rbh
04302015_35_scaffold_23_13
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11378..11956
DNA (579bp) protein (193aa)
Putative membrane protein n=1 Tax=Polaromonas sp. CF318 RepID=J2KV57_9BURK
Putative membrane protein {ECO:0000313|EMBL:EJL76908.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein
04302015_35_scaffold_23_14
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11971..12621)
DNA (651bp) protein (217aa)
glutathione S-transferase; K00799 glutathione S-transferase [EC:2.5.1.18] rbh
Glutathione S-transferase (Glutathione transferase)-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y4R3_RAMTT rbh
Glutathione S-transferase (Glutathione transferase)-like protein {ECO:0000313|EMBL:AEG91381.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
04302015_35_scaffold_23_15
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12618..13538)
DNA (921bp) protein (307aa)
Putative TIM-barrel fold metal-dependent hydrolase n=1 Tax=Polaromonas sp. CF318 RepID=J2K9H6_9BURK
Putative TIM-barrel fold metal-dependent hydrolase {ECO:0000313|EMBL:EJL76910.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
amidohydrolase 2 rbh
04302015_35_scaffold_23_16
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13542..14234)
DNA (693bp) protein (231aa)
carboxymethylenebutenolidase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45] rbh
Candidate carboxymethylenebutenolidase (Dienelactone hydrolase) n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y4R1_RAMTT rbh
Candidate carboxymethylenebutenolidase (Dienelactone hydrolase) {ECO:0000313|EMBL:AEG91379.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
04302015_35_scaffold_23_17
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14295..14897)
DNA (603bp) protein (201aa)
2-hydroxychromene-2-carboxylate isomerase n=1 Tax=Polaromonas sp. CF318 RepID=J2TEW8_9BURK
2-hydroxychromene-2-carboxylate isomerase {ECO:0000313|EMBL:EJL76912.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
DSBA oxidoreductase
04302015_35_scaffold_23_18
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15005..15751
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J2KV62_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL76913.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
short-chain dehydrogenase/reductase SDR rbh
04302015_35_scaffold_23_19
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15751..16389
DNA (639bp) protein (213aa)
Multiple antibiotic resistance (MarC)-related protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12GY9_POLSJ rbh
multiple antibiotic resistance (MarC)-like proteins; K05595 multiple antibiotic resistance protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
04302015_35_scaffold_23_20
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16475..17515)
DNA (1041bp) protein (347aa)
Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XXV7_LEPCP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB32726.1}; Flags: Precursor;; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
04302015_35_scaffold_23_21
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17578..18195)
DNA (618bp) protein (206aa)
Cyclic nucleotide-binding domain (CNMP-BD) protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12GZ3_POLSJ
cyclic nucleotide-binding domain-containing protein
Cyclic nucleotide-binding domain (CNMP-BD) protein {ECO:0000313|EMBL:ABE42199.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_35_scaffold_23_22
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18174..18869)
DNA (696bp) protein (232aa)
Putative lipoprotein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12GZ4_POLSJ
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ABE42198.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_35_scaffold_23_23
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18866..19819)
DNA (954bp) protein (318aa)
Mammalian cell entry related protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12GZ5_POLSJ rbh
hypothetical protein; K02067 putative ABC transport system substrate-binding protein rbh
Mammalian cell entry related protein {ECO:0000313|EMBL:ABE42197.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_35_scaffold_23_24
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19986..20774)
DNA (789bp) protein (263aa)
ABC transporter related protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12GZ6_POLSJ
ABC transporter-like protein; K02065 putative ABC transport system ATP-binding protein
ABC transporter related protein {ECO:0000313|EMBL:ABE42196.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_35_scaffold_23_25
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20917..22071)
DNA (1155bp) protein (385aa)
Putative integral membrane protein n=1 Tax=Polaromonas sp. CF318 RepID=J3CY21_9BURK
Putative integral membrane protein {ECO:0000313|EMBL:EJL80829.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein; K02066 putative ABC transport system permease protein
04302015_35_scaffold_23_26
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22286..23272)
DNA (987bp) protein (329aa)
Transcriptional regulator, LysR family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VIM8_POLNA rbh
LysR family transcriptional regulator rbh
Tax=GWA2_Curvibacter_64_110_curated
04302015_35_scaffold_23_27
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23378..24919
DNA (1542bp) protein (514aa)
methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27); K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] rbh
Methylmalonic acid semialdehyde dehydrogenase n=1 Tax=Polaromonas sp. CF318 RepID=J2KS44_9BURK rbh
Methylmalonic acid semialdehyde dehydrogenase {ECO:0000313|EMBL:EJL82930.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
04302015_35_scaffold_23_28
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25045..26805
DNA (1761bp) protein (587aa)
glucose-methanol-choline oxidoreductase; K00108 choline dehydrogenase [EC:1.1.99.1]
Glucose-methanol-choline oxidoreductase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12GZ8_POLSJ
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:ABE42194.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_35_scaffold_23_29
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27050..27826)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TXQ8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE11246.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
04302015_35_scaffold_23_30
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28019..28546)
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YDN8_9BURK
aspartyl protease-like protein; K06985 aspartyl protease family protein
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
Displaying items 1-30 of 232 in total

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