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04302015_35_scaffold_272

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Displaying items 1-30 of 36 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_35_scaffold_272_1
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..570
DNA (570bp) protein (190aa)
uroporphyrin-III C-methyltransferase; K02303 uroporphyrin-III C-methyltransferase [EC:2.1.1.107] rbh
Uroporphyrinogen-III C-methyltransferase {ECO:0000313|EMBL:ABM37459.1}; EC=2.1.1.107 {ECO:0000313|EMBL:ABM37459.1};; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
Uroporphyrinogen-III C-methyltransferase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VP81_POLNA rbh
04302015_35_scaffold_272_2
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

560..820
DNA (261bp) protein (87aa)
cob(I)alamin adenosyltransferase (EC:2.5.1.17); K00798 cob(I)alamin adenosyltransferase [EC:2.5.1.17]
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:ABD70334.1}; EC=2.5.1.17 {ECO:0000313|EMBL:ABD70334.1};; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
Cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21V69_RHOFD
04302015_35_scaffold_272_3
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

886..1968
DNA (1083bp) protein (361aa)
Transposase IS116/IS110/IS902 n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q129N2_POLSJ rbh
transposase IS116/IS110/IS902 rbh
Transposase IS116/IS110/IS902 {ECO:0000313|EMBL:ABE44760.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_35_scaffold_272_4
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2132..2425
DNA (294bp) protein (98aa)
Plasmid maintenance system antidote protein, XRE family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q11ZQ7_POLSJ
XRE family plasmid maintenance system antidote protein
Plasmid maintenance system antidote protein, XRE family {ECO:0000313|EMBL:ABE47235.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_35_scaffold_272_5
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2504..2821
DNA (318bp) protein (106aa)
Putative DNA-binding protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUK1_9BURK
putative DNA-binding protein
Tax=GWA2_Curvibacter_64_110_curated
04302015_35_scaffold_272_6
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3096..3893)
DNA (798bp) protein (266aa)
Ribonucleoside-triphosphate reductase, anaerobic-like n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222C9_RHOFD rbh
ribonucleoside-triphosphate reductase, anaerobic-like protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
04302015_35_scaffold_272_7
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3841..4050)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222D0_RHOFD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
04302015_35_scaffold_272_8
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4071..6086)
DNA (2016bp) protein (672aa)
anaerobic ribonucleoside triphosphate reductase (EC:1.17.4.2); K00527 ribonucleoside-triphosphate reductase [EC:1.17.4.2] rbh
Ribonucleoside-triphosphate reductase, anaerobic n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222D1_RHOFD rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
04302015_35_scaffold_272_9
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6681..7499
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XXP5_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG91848.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
04302015_35_scaffold_272_10
unknown

Not on your lists

7486..7926
DNA (441bp) protein (147aa)

This feature has no annotations

04302015_35_scaffold_272_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8021..8488
DNA (468bp) protein (156aa)
Response regulator receiver protein id=3297554 bin=GWF2_Lentisphaerae_49_21 species=Massilia timonae genus=Massilia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
response regulator receiver protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
04302015_35_scaffold_272_12
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8520..10055
DNA (1536bp) protein (512aa)
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q123X4_POLSJ
04302015_35_scaffold_272_13
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10095..10409)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA010 RepID=U9LXW4_PSEAI
transposase Tn3 family protein
Transposase Tn3 family protein {ECO:0000313|EMBL:ADG30788.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_35_scaffold_272_14
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10586..11179)
DNA (594bp) protein (198aa)
Patatin n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SC74_9BURK
Patatin {ECO:0000313|EMBL:EHP39852.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
patatin
04302015_35_scaffold_272_15
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11350..12297
DNA (948bp) protein (316aa)
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa RepID=U8ERS4_PSEAI
hypothetical protein
Tax=GWA2_Gallionellales_54_124_curated
04302015_35_scaffold_272_16
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12325..12975
DNA (651bp) protein (217aa)
Uncharacterized protein n=2 Tax=Ralstonia solanacearum RepID=Q8Y160_RALSO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAD14534.1}; TaxID=267608 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum).;"
04302015_35_scaffold_272_17
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13072..13329)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Z88_RHOFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD68915.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
04302015_35_scaffold_272_18
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13410..14162)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q11ZC0_POLSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE47372.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_35_scaffold_272_19
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14190..14648)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q11ZB4_POLSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE47378.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_35_scaffold_272_20
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14937..15185)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XI36_VARPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU51805.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
04302015_35_scaffold_272_21
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15315..15818)
DNA (504bp) protein (168aa)
Transcriptional regulator, XRE family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q120T3_POLSJ
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABE46959.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_35_scaffold_272_22
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16086..16574)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q11ZC0_POLSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE47372.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_35_scaffold_272_23
Pseudomonas sp. M47T1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16912..17382)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. M47T1 RepID=I4MZY8_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EIK94778.1}; TaxID=1179778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. M47T1.;"
RES domain-containing protein
04302015_35_scaffold_272_24
Yersinia pseudotuberculosis, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17545..18132)
DNA (588bp) protein (196aa)
Phage intergrase n=1 Tax=Yersinia enterocolitica subsp. enterocolitica WA-314 RepID=K1B423_YEREN
Putative uncharacterized protein api48 {ECO:0000313|EMBL:CAF28522.1}; TaxID=633 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia pseudotuberculosis.;"
phage intergrase
04302015_35_scaffold_272_25
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18196..18876)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q120Y5_POLSJ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE46907.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_35_scaffold_272_26
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18876..19373)
DNA (498bp) protein (166aa)
Transcriptional regulator, XRE family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q120Y4_POLSJ
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABE46908.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_35_scaffold_272_27
unknown

Not on your lists

comp(20043..21320)
DNA (1278bp) protein (426aa)

This feature has no annotations

04302015_35_scaffold_272_28
unknown

Not on your lists

comp(21314..21805)
DNA (492bp) protein (164aa)

This feature has no annotations

04302015_35_scaffold_272_29
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21965..22633
DNA (669bp) protein (223aa)
Tax=GWA2_Curvibacter_64_110_curated
04302015_35_scaffold_272_30
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22593..24785
DNA (2193bp) protein (731aa)
Uncharacterized protein n=1 Tax=Ralstonia syzygii R24 RepID=G3A7S8_9RALS rbh
hypothetical protein
Tax=GWA2_Curvibacter_64_110_curated
Displaying items 1-30 of 36 in total

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