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04302015_35_scaffold_60

Search features with annotation key words

Displaying items 1-30 of 179 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_35_scaffold_60_1
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..89
DNA (87bp) protein (29aa)
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
04302015_35_scaffold_60_2
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86..547
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y660_9BURK
Tax=GWA2_Gallionellales_54_124_curated
04302015_35_scaffold_60_3
Polynucleobacter necessarius, Polynucleobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(852..1748)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1) RepID=A4SVF5_POLSQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP33469.1}; TaxID=312153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter.;" source="Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 /; CIP 109841 / QLW-P1DMWA-1).;"
04302015_35_scaffold_60_4
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1878..2825
DNA (948bp) protein (316aa)
Glycosyl transferase family 2 id=1703848 bin=GWB2_Geobacter-like_52_12 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
putative glycosyltransferase
Tax=GWA2_Curvibacter_64_110_curated
04302015_35_scaffold_60_5
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3024..3776
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F5B3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDL00705.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
FkbM family methyltransferase
04302015_35_scaffold_60_6
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3933..4775
DNA (843bp) protein (281aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadace
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55); K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] rbh
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Janthinobacterium lividum RepID=UPI000287DBBE rbh
04302015_35_scaffold_60_7
Methylococcaceae bacterium Sn10-6, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4810..5496)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P3N7_9RHOB rbh
Glycosyltransferase {ECO:0000313|EMBL:KJV07695.1}; TaxID=1632867 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae.;" source="Methylococcaceae bacterium Sn10-6.;"
hypothetical protein
04302015_35_scaffold_60_8
Leptospira borgpetersenii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(5493..7025)
DNA (1533bp) protein (511aa)
Putative transferase, LIC12162 family n=1 Tax=Leptospira borgpetersenii serovar Mini str. 200901116 RepID=M6V4H8_LEPBO
Ctg7180000004813, whole genome shotgun sequence {ECO:0000313|EMBL:EMO49936.1}; TaxID=1192864 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira borgpetersenii serovar Mini str. 200901116.;"
hypothetical protein
04302015_35_scaffold_60_9
Polynucleobacter necessarius, Polynucleobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7309..8220)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1) RepID=A4SVF5_POLSQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP33469.1}; TaxID=312153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter.;" source="Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 /; CIP 109841 / QLW-P1DMWA-1).;"
04302015_35_scaffold_60_10
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8297..9646)
DNA (1350bp) protein (450aa)
O-antigen ligase n=3 Tax=Burkholderia multivorans RepID=J4R5I4_9BURK
Putative membrane protein {ECO:0000313|EMBL:EEE04931.1}; TaxID=513052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans CGD2.;"
lipid A core-like protein
04302015_35_scaffold_60_11

Not on your lists

comp(9691..10977)
DNA (1287bp) protein (429aa)
Glycosyltransferase-like protein n=1 Tax=mine drainage metagenome RepID=T0YIX2_9ZZZZ rbh
Glycosyltransferase-like protein {ECO:0000313|EMBL:EQD31887.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
04302015_35_scaffold_60_12
GWA2_Gallionellales_55_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11004..12824)
DNA (1821bp) protein (607aa)
Uncharacterized protein id=2633922 bin=GWC2_Proteo_65_14_Ab886 species=Coxiella burnetii genus=Coxiella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria rbh
family 2 glycosyl transferase
Tax=GWA2_Gallionellales_55_18_curated
04302015_35_scaffold_60_13
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12934..14772)
DNA (1839bp) protein (613aa)
Polysaccharide biosynthesis protein CapD n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CQ84_SIDLE rbh
polysaccharide biosynthesis protein CapD rbh
Polysaccharide biosynthesis protein CapD {ECO:0000313|EMBL:ADE13105.1}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
04302015_35_scaffold_60_14
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14765..15742)
DNA (978bp) protein (326aa)
Glycosyl transferase, family 4, conserved region n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CQ85_SIDLE rbh
glycosyl transferase, family 4, conserved region rbh
Glycosyl transferase, family 4, conserved region {ECO:0000313|EMBL:ADE13106.1}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
04302015_35_scaffold_60_15
RIFOXYB12_FULL_Gallionellales_54_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15976..16917)
DNA (942bp) protein (314aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SE01_GALCS rbh
NAD-dependent epimerase/dehydratase rbh
Tax=RIFOXYB12_FULL_Gallionellales_54_9_curated
04302015_35_scaffold_60_16
unknown

Not on your lists

comp(16925..17761)
DNA (837bp) protein (279aa)

This feature has no annotations

04302015_35_scaffold_60_17
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(17786..18886)
DNA (1101bp) protein (367aa)
Glycosyl transferase, group 1 n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NJV6_9DELT rbh
hypothetical protein rbh
Tax=CG_Proteo_01
04302015_35_scaffold_60_18
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(18976..20607)
DNA (1632bp) protein (544aa)
UPI0003D04F79 related cluster n=1 Tax=unknown RepID=UPI0003D04F79
heparinase II/III family protein rbh
Tax=CG_Proteo_01
04302015_35_scaffold_60_19
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(20604..22745)
DNA (2142bp) protein (714aa)
Putatve zinc-binding dehydrogenase n=1 Tax=Vibrio vulnificus (strain YJ016) RepID=Q7MPK6_VIBVY rbh
putatve zinc-binding dehydrogenase rbh
Tax=CG_Proteo_01
04302015_35_scaffold_60_20
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(22768..23988)
DNA (1221bp) protein (407aa)
wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (EC:1.1.1.-); K02472 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.-] rbh
Nucleotide sugar dehydrogenase n=1 Tax=Campylobacter sp. FOBRC14 RepID=J4V7F9_9PROT rbh
Tax=CG_Proteo_01
04302015_35_scaffold_60_21
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(24240..25364)
DNA (1125bp) protein (375aa)
wecB2; UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14); K01791 UDP-N-acetylglucosamine 2-epimerase [EC:5.1.3.14] rbh
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Pseudomonas putida RepID=UPI000375C4ED rbh
Tax=CG_Proteo_01
04302015_35_scaffold_60_22
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(25364..27274)
DNA (1911bp) protein (637aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000372B2A2 rbh
asnB-1; asparagine synthase rbh
Tax=CG_Proteo_01
04302015_35_scaffold_60_23
Curvibacter putative symbiont of Hydra magnipapillata, Curvibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27456..27854)
DNA (399bp) protein (133aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YDI7_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:CBA31302.1}; TaxID=667019 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter.;" source="Curvibacter putative symbiont of Hydra magnipapillata.;"
04302015_35_scaffold_60_24
Curvibacter putative symbiont of Hydra magnipapillata, Curvibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27854..28393)
DNA (540bp) protein (180aa)
UDP-glucose-4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YDI7_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:CBA31302.1}; TaxID=667019 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter.;" source="Curvibacter putative symbiont of Hydra magnipapillata.;"
04302015_35_scaffold_60_25
Curvibacter putative symbiont of Hydra magnipapillata, Curvibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28390..29472)
DNA (1083bp) protein (361aa)
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YDI8_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:CBA31304.1}; TaxID=667019 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter.;" source="Curvibacter putative symbiont of Hydra magnipapillata.;"
glycosyl transferase group 1 family protein
04302015_35_scaffold_60_26
unknown

Not on your lists

comp(29459..30700)
DNA (1242bp) protein (414aa)

This feature has no annotations

04302015_35_scaffold_60_27
Candidatus Pelagibacter sp. HTCC7211, Candidatus Pelagibacter, Pelagibacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30697..31584)
DNA (888bp) protein (296aa)
Glycosyltransferase n=1 Tax=Candidatus Pelagibacter sp. HTCC7211 RepID=B6BQY7_9PROT rbh
Glycosyltransferase {ECO:0000313|EMBL:EDZ59696.1}; TaxID=439493 species="Bacteria; Proteobacteria; Alphaproteobacteria; Pelagibacterales; Pelagibacteraceae; Candidatus Pelagibacter.;" source="Candidatus Pelagibacter sp. HTCC7211.;"
glycosyl transferase
04302015_35_scaffold_60_28
R_Proteobacteria_53_8, Proteobacteria, Bacteria

Not on your lists

comp(31581..32498)
DNA (918bp) protein (306aa)
UDP-glucose 4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] rbh
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000365D3E5 rbh
Tax=RIFCSPLOWO2_02_FULL_Proteobacteria_53_8_curated
04302015_35_scaffold_60_29
R_Proteobacteria_53_8, Proteobacteria, Bacteria

Not on your lists

comp(32553..33314)
DNA (762bp) protein (254aa)
rfbF; glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33); K00978 glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] rbh
Glucose-1-phosphate cytidylyltransferase (CDP-glucose pyrophosphorylase) n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G478_HERAR rbh
Tax=RIFCSPLOWO2_02_FULL_Proteobacteria_53_8_curated
04302015_35_scaffold_60_30
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33350..33799)
DNA (450bp) protein (150aa)
dTDP-4-dehydrorhamnose 35-epimerase-like protein (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000380CD78
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
Displaying items 1-30 of 179 in total

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